Query= MSMg01no288_k23.b1 MSMg01no288_k23.b1 CHROMAT_FILE:
MSMg01no288_k23.b1 PHD_FILE: MSMg01no288_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:49 2005
(345 letters)
>mm_chr15_98331832_98332578
Length = 747
Score = 549 bits (284), Expect = e-161
Identities = 338/374 (90%), Gaps = 32/374 (8%)
Strand = Plus / Minus
Query: 1 gcctagaactcacagagatcagcctgtctctgactgctgaatgatg---ttatcccaggt 57
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 700 gcctagaactcacagagatcagcctgtctctgactgctgaatgatgggatta---gaggt 644
Query: 58 gtgtgtcaccaccacccaactggattttccttttgaccttaaggcaaagaataaatacca 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gtgtgtcaccaccacccaactggattttccttttgaccttaaggcaaagaataaatacca 584
Query: 118 cagaggtagtt-------------------t-tgtgtgtgtgtgtgcg------cgcgca 151
||||||||||| | |||||||||||||||| ||||||
Sbjct: 583 cagaggtagttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgcgcacgcgca 524
Query: 152 ttttaagcaattgctctaccattaaatgacatttccagtcttagcagagacattctgagt 211
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 523 ttttaagcaattgctctaccattaaatgacatttccagtcttagcagagatattctgagt 464
Query: 212 atttgcaaatacttctattcagctcaggtctgacctacttcccaagcaagcttctggata 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 atttgcaaatacttctattcagctcaggtctgacctacttcccaagcaagcttctggata 404
Query: 272 gaggaatttttattatcttcctctgttctaccctgccggggaggttgtctgtcctagatt 331
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 403 gaggactttttattatcttcctctgttctaccctggcggggaggttgtctgtcctagatt 344
Query: 332 ctctatgccctcag 345
||||||||||||||
Sbjct: 343 ctctatgccctcag 330
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 747
Length adjustment: 9
Effective length of query: 336
Effective length of database: 738
Effective search space: 247968
Effective search space used: 247968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_k23.g1 MSMg01no288_k23.g1 CHROMAT_FILE:
MSMg01no288_k23.g1 PHD_FILE: MSMg01no288_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:49 2005
(288 letters)
>mm_chr15_98172740_98173427
Length = 688
Score = 520 bits (269), Expect = e-152
Identities = 281/285 (98%)
Strand = Plus / Plus
Query: 1 acatgccgggagagcaaagtgagcaaaggaaagaaggactgcgctggtgaccatggagag 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatgccaggagagcaaagtgagcaaaggaaagaaggactgcgctggtgaccatggagag 260
Query: 61 cgccagcttcacgtgtgaacctcagatagactcaccagtgtaatgtaagtcacttcattc 120
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgccagcttcacacgtgaacctcagatagactcaccagtgtaatgtaagtcacttcattc 320
Query: 121 tgcaggcttctccctcgaagccatttagagaccctcaggggaaaagccttttaaaaacaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tgcaggcttctccctcgaagccatttagagaccctcaggggaaaagcctttttaaaacaa 380
Query: 181 aatgaaagtttccactttggctgtgcctgatgcttgaaattccacccatcattgatttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgaaagtttccactttggctgtgcctgatgcttgaaattccacccatcattgatttgt 440
Query: 241 gcaactttgatgtaacaaactgaagacaaataattacgggataca 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaactttgatgtaacaaactgaagacaaataattacgggataca 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
