CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTGAGAGTATCGCCCATGGGTCAAACTTGAGACTATGATTACCCTT
TAGATTTGTCTACCTGTATCTGTCGGCAGTGTATGTCATCACTGTAACAG
ACAGTGAGAAATGCCAACTCGTGTTACCTGGGTTGCCAGGAATTTTGAAT
GTGTTCTTGCTGTTTGGCATTTTAAAGTCCCCATCCTAGGATTTTCCTGA
TCATTAGACACAGAGAAGTGAGTGTTGGTCCATATGTTTACGACTCTCAT
CTCTTTTGCATCTTGTCAACTTTCCCCATTGAGCCTTGACTATGTGTGCA
TACAGCACTCATGTCCATTCTGTCTGCTAAGGCCAGTGTATCTGCAGTAC
TGAAGTTGCTGTTGTTTTTAAATCTTTTCTCTTTATTTCCAAGATGTAGC
TGATGGCCTCTTTTCTACCTTCAGCTTTTGTCATGTTTTGTGTTTCTGTG
TTCTCCTCTGTAGTTTATGACTTTAATGCCACAGTCTCAAAACTCAAAAC
AAAAGCAAAAAAACAAAATGAACAAACAAACAAACAAACAAAAAACCTAT
TTTTTAGCTTTGGTTTTTAGTTTTTACCACTGTATGTACATGAAATTAGT
GGTTTTTGTGGAAGGTTTTTATGTATATACCTTATGATTTTTGNTTTCTT
ANNAAGTAGGCTAAATATTCTTTTATCATTAAATATAGATAAGGAGACTT
G

CCATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTGCCCCATTT
TACTGGAGAGGATGTGGAGAAAGAGGAACACTCCTTCATTGTTGGTTGGA
TTACAAGCTTGTACAACCTTTCTGGAAATCAGTCTGGTGGTTCGTCAGAA
AATTGGACATAGTACTACCGGAGGATCCAGCAATACCTGTCCTGGGCATA
TGTCCAGAAGATGTTCCAACTGTTAATAAGAACACATGCTCCACTATGTT
CATAGCAGCCTTATTTATAATAGTCAGAAGCTGGAAAGAACCCAGATGTC
CCTCAACAGAGGAATGTATACAGAAAATGTGGTACATTTACACAATGGAG
TAGTACTCAGCTATTAAAAACAATGAATTTATGAAATTCCTAGGCAAATG
GATGAATCTGGAGGATATCATCCTGAGTGAGGTATCCCAATCATGGAAGA
ACTCACATGATATGCACTCACTGATAAGTGGATACGAGCCCAGAAACTTA
GAATACCCAAGATACAATTTGCAAAACACATGAAACTCAAGAAAAAGGAA
GACTAAAGTGTGGATGCTTCACCCTTTCTTATAATTGTGAACAAAATATC
CATGGAAGGAGTTACAGAGACAAAGCTTGGAGCTGAGACGAAAGGATGTA
CCATCTAGATACTACCATACCCGGGGATCCATCCCATAATTAGCCACCAA
AT

Query= MSMg01no290_o23.b1 MSMg01no290_o23.b1 CHROMAT_FILE:
MSMg01no290_o23.b1 PHD_FILE: MSMg01no290_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:36 2005
         (649 letters)



>mm_chr15_43327604_43328652
          Length = 1049

 Score = 1195 bits (618), Expect = 0.0
 Identities = 639/646 (98%), Gaps = 2/646 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttgagagta-tcgcccatgggtcaaacttgagactatgattaccctttagattt 63
           ||||||||||||| | | |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 205 gaattcttgagagaagt-gcccatgggtcaaacttgagactacgattaccctttagattt 263

                                                                       
Query: 64  gtctacctgtatctgtcggcagtgtatgtcatcactgtaacagacagtgagaaatgccaa 123
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtctacctgtatctgtaggcagtgtatgtcatcactgtaacagacagtgagaaatgccaa 323

                                                                       
Query: 124 ctcgtgttacctgggttgccaggaattttgaatgtgttcttgctgtttggcattttaaag 183
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctagtgttacctgggttgccaggaattttgaatgtgttcttgctgtttggcattttaaag 383

                                                                       
Query: 184 tccccatcctaggattttcctgatcattagacacagagaagtgagtgttggtccatatgt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tccccatcctaggattttcctgatcattagacacagagaagtgagtgttggtccatatgt 443

                                                                       
Query: 244 ttacgactctcatctcttttgcatcttgtcaactttccccattgagccttgactatgtgt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttacgactctcatctcttttgcatcttgtcaactttccccattgagccttgactatgtgt 503

                                                                       
Query: 304 gcatacagcactcatgtccattctgtctgctaaggccagtgtatctgcagtactgaagtt 363
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcatacagtactcatgtccattctgtctgctaaggccagtgtatctgcagtactgaagtt 563

                                                                       
Query: 364 gctgttgtttttaaatcttttctctttatttccaagatgtagctgatggcctcttttcta 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gctgttgtttttaaatcttttctctttatttccaagatgtagctgatggcctcttttcta 623

                                                                       
Query: 424 ccttcagcttttgtcatgttttgtgtttctgtgttctcctctgtagtttatgactttaat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccttcagcttttgtcatgttttgtgtttctgtgttctcctctgtagtttatgactttaat 683

                                                                       
Query: 484 gccacagtctcaaaactcaaaacaaaagcaaaaaaacaaaatgaacaaacaaacaaacaa 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gccacagtctcaaaactcaaaacaaaagcaaaaaaacaaaatgaacaaacaaacaaacaa 743

                                                                       
Query: 544 acaaaaaacctattttttagctttggtttttagtttttaccactgtatgtacatgaaatt 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 acaaaaaacctattttttagctttggtttttagtttttaccactgtatgtacatgaaatt 803

                                                         
Query: 604 agtggtttttgtggaaggtttttatgtatataccttatgatttttg 649
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 agtggtttttgtggaaggtttttatgtatataccttatgatttttg 849


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space:   663921
Effective search space used:   663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)