Query= MSMg01no291_p09.b1 MSMg01no291_p09.b1 CHROMAT_FILE:
MSMg01no291_p09.b1 PHD_FILE: MSMg01no291_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:53 2005
(690 letters)
>mm_chr12_57918650_57919738
Length = 1089
Score = 1166 bits (603), Expect = 0.0
Identities = 636/647 (98%), Gaps = 4/647 (0%)
Strand = Plus / Minus
Query: 44 cgatgccaatcccagagaaatggagacagtagtgtctggcaaataatttgaaataattat 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 cgatgccaatcccagagaaatggagacagtagtgtctggcaaataatttgaaataattat 1030
Query: 104 ttataaaagtcctataaagctacaagcagctacagtaaatgtcttagggtttctaatgct 163
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1029 ttataaaagtcctataaagctacaagcagctacagtaaatgtcttaggttttctaatgct 970
Query: 164 gtgatgaaacaccatgaccaaaaaactcttggggaggaaggggcttattcaacttacact 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 gtgatgaaacaccatgaccaaaaaactcttggggaggaaggggcttattcaacttacact 910
Query: 224 tccacatcatgaaagaaaatcagggcaggaactcaagcagggcaagaacttggagaaaag 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 tccacatcatgaaagaaaatcagggcaggaactcaagcagggcaagaacttggagaaaag 850
Query: 284 aggagatagaggccatggacag-tgctgcttactggcttgctcctcatggcttgctcggc 342
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 849 aggagatagaggccatggacagatgctgcttattggcttgctcctcatggcttgctcggc 790
Query: 343 ctgctttcttataaaacccaggaccacaaccccaggaatagcaccacccacaatgagtca 402
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 789 ctgctttcttataaaacgcaggaccacaagcccaggaatagcaccacccacaatgagtca 730
Query: 403 gcactaaaaaaagtacctaaccttacaaacaaaaatccccaaaacaaaagaagaaggtcc 462
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 729 gcact-aaaaatgtacctaaccttacaaacaaaaatccccaaaacaaaagaagaagatcc 671
Query: 463 taccatccatgagattgcaggtgaacctagatgaccttttgctcagagaaacgaatatag 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 taccatccatgagattgcaggtgaacctagatgaccttttgctcagagaaacgaatatag 611
Query: 523 ttcaaagacagttacttatacatggcatattaaaagcccataaaaatg-aaggaatacaa 581
|||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||
Sbjct: 610 ttcaaagacagttacttacacatggcatattaaaagcccataaaaa-gcaaggaatacaa 552
Query: 582 caatagctgtgagaggctggcatgtaggggagccaagaaaacgttgatctaatggattca 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 caatagctgtgagaggctggcatgtaggggagccaagaaaacgttgatctaatggattca 492
Query: 642 attcatgttttaggatgatcaagttctgaagcaaatcttgcatatag 688
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 attcatgttttaggatgatcaagttctgaagcaaatcttgcatatag 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1089
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1079
Effective search space: 733720
Effective search space used: 733720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_p09.g1 MSMg01no291_p09.g1 CHROMAT_FILE:
MSMg01no291_p09.g1 PHD_FILE: MSMg01no291_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:53 2005
(371 letters)
>mm_chr15_54346854_54347627
Length = 774
Score = 636 bits (329), Expect = 0.0
Identities = 361/373 (96%), Gaps = 3/373 (0%)
Strand = Plus / Minus
Query: 1 aaaacctagttaaagccagtaggtaggtctttaacgccaagtagagctaacttagtagct 60
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 573 aaaacctagttaaagccagtaggtaggtctttaatgggaagtagagctaacttagtagct 514
Query: 61 aagtagctatggcaggaggggtaagtataaagcagagtctataacacaaacgtagatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 513 aagtagctatggcaggaggggtaagtataaagcagagtctataacacaaacgtaggtgtt 454
Query: 121 ttggtttcaatgctttatagtgcttaggactaaatgaatgtatgattgctactctaatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttggtttcaatgctttatagtgcttaggactaaatgaatgtatgattgctactctaatgc 394
Query: 181 aaaaagaaatgttgctgtattaggccatataagtttggatagaatattctgctactcaat 240
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aaaaagaaatgttgctatattaggccatataagtttggatagaatattctgctactcaac 334
Query: 241 acaatgaacctatttaagcaatagtgtgctagttattaaattatctcatttcttggtgca 300
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 333 acaatgaacctatttaagcaatagtgtgctagttattcaattatctcatttcttagtgca 274
Query: 301 gtgtagatactccatatttatgaatatgctcctaggttaaacaaaattttt---aaaaaa 357
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 273 gtgtagatactccatatttatgaatatgctcctaggttaaacaaatttttttaaaaaaaa 214
Query: 358 acctagttaagtt 370
|||||||||||||
Sbjct: 213 acctagttaagtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 774
Length adjustment: 9
Effective length of query: 362
Effective length of database: 765
Effective search space: 276930
Effective search space used: 276930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
