CGACTCACTACAATTCCGAAGGTGCCGCGGNAATTCCAAAAATACTGCTG
TAAGGNAGAGTGCTCAATAAATACTTCTTTATTGATAACTTTACATTTCT
TTATACCCCATGAATTGGTTTATTTAATACATAGATCAGGGTAGAGTTTG
TTGTAGTTAAAACAACAGTTTCAACAAAAACTTAAAACACTGAAAGGACA
ATAAAATTCCCAAAGTAAACGTAAGCCTTTTCTTCTTTTTATATTTTGTT
ACTGTCTTTATGAAGCCAATGTTGATCTACTTGGAACAACNCACCACCCG
ATTAGATAATTTACAACCGCCCAGCNCCCGACANCAANANAATTTTATTT
TTCCCCCCCCCCCAGACCTTCACATGAACTCTTGCTTCCTCTTATATCTA
TCACCCCCCAAAATAAAAAGATATTTTCAGAATTTTACCAAGTCTTTACA
AGAAGCGGCTTCCTTATATCTCATCAATTAGACATTATTTCAACACTTCT
AATTCTACTGAATTTTACTTCATTCGTACAGCATAAACTTATATTGTACC
CCTCCTTACCATGCTCGCTCCTCACAACTCTTCTGCTCTTTTATCTGACT
ATCTCATTGAATTCAACCGCCCCCGTCAAACTTTTCCCACAACCCCTTTT
TTTTTTTTTTTCCCCTATTACCCCTAATTGGTTCTTCCCCTTTCTCACCC
CTGGTTCAGAATAGTGTTAGTTTTCTCCTTTACGTCCATTCCCACCTC

CGAATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTGATACCCAGGCCTACAAGT
ATTTAAGTTTTAATCATATATATATCCCCATATATATATATGTATATATA
TATATATATATATATATATATTTCCCCAGCCCTGAGTAGACTAAACAAAT
CCCAAAGGGATCGTTTTATAACCTGGGTTGGTTCTGCACCTGGCCTGTAC
ACATTTAGAAATCCCTACAGGAGCTTTGAGTCCTTGACTGCCTTTTGAGC
TTGCTTTGTAACTCCCTCCAGCTGTATTAGAGGATGGGTCTGTGGATTTT
GCCCCACACCATTTTTTTTTTTTTCCCCCCCCCCCCCCGCGCCGCCAGGA
GAAACCTTTGTTTTGGTGGCCCCCCCCCACAAAAAAAAAAGAAACTCTGG
GGGGTGCCGCGCCCCCCCTTCACCGCCCCCCGTCCTCTCATGACTGCCTG
CCCCCCCCTCCCTACATATTCCTTTCTTTTCGCCCCGCCGCCTCTCCCCT
CTCCTCTTCGCTTTCCTCTTCCCCTTGTTTCCCCCCTTATCCCCGCTATA
TCCCCCCCCGCCACCCTCCTTTTATGCCCCCCTTTTCCCTCTTCCTCCTC
CTCCGTCCCCCCCCGAATCGCCTCCCCATTCTCTCTTTGCCCGCTCCTCG
TTCCGCCGCCCCTCCCCTTACCTCCCCTATCGCTTGCTCTTATGCATGTG
CTTTCCCCTACCCTCTCTCTCCCCTTCCCCCTCCCTCTCTTCATTTTCGC
CGCTTCGTTTCGCTATCCCCCTTCCTCCCTTCCA

Query= MSMg01no292_d03.b1 MSMg01no292_d03.b1 CHROMAT_FILE:
MSMg01no292_d03.b1 PHD_FILE: MSMg01no292_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:11 2005
         (124 letters)



>mm_chr15_46896495_46897018
          Length = 524

 Score =  240 bits (124), Expect = 2e-68
 Identities = 124/124 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaattggtttatttaatacatagatcagggtagagtttgttgtagttaaaacaacagttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattggtttatttaatacatagatcagggtagagtttgttgtagttaaaacaacagttt 260

                                                                       
Query: 61  caacaaaaacttaaaacactgaaaggacaataaaattcccaaagtaaacgtaagcctttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caacaaaaacttaaaacactgaaaggacaataaaattcccaaagtaaacgtaagcctttt 320

               
Query: 121 cttc 124
           ||||
Sbjct: 321 cttc 324


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 524
Length adjustment: 8
Effective length of query: 116
Effective length of database: 516
Effective search space:    59856
Effective search space used:    59856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no292_d03.g1 MSMg01no292_d03.g1 CHROMAT_FILE:
MSMg01no292_d03.g1 PHD_FILE: MSMg01no292_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:11 2005
         (236 letters)



>mm_chr15_47069417_47070052
          Length = 636

 Score =  275 bits (142), Expect = 2e-78
 Identities = 157/162 (96%)
 Strand = Plus / Minus

                                                                       
Query: 75  atatatatatatatatatatttccccagccctgagtagactaaacaaatcccaaagggat 134
           |||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 atatatatatatatttttttttccccagccctgagtagactaaacaaatcccaaagggat 397

                                                                       
Query: 135 cgttttataacctgggttggttctgcacctggcctgtacacatttagaaatccctacagg 194
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 cgttttataacctggcttggttctgcacctggcctgtacacatttagaaatccctacagg 337

                                                     
Query: 195 agctttgagtccttgactgccttttgagcttgctttgtaact 236
           ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 336 agctttgagtccttgactgccttctgagcttgctttgtaact 295


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space:   142329
Effective search space used:   142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)