Query= MSMg01no293_m12.b1 MSMg01no293_m12.b1 CHROMAT_FILE:
MSMg01no293_m12.b1 PHD_FILE: MSMg01no293_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:18 2005
(653 letters)
>mm_chr15_99963703_99964756
Length = 1054
Score = 1193 bits (617), Expect = 0.0
Identities = 641/649 (98%), Gaps = 1/649 (0%)
Strand = Plus / Minus
Query: 6 aattatacctgaaacattagcagaaaggctagcgttgtgactgaatgtcacaggtgctaa 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 aattatacctgaaacattagcagaaaggctagcgttgtgactgaatgtcacaggtgctaa 665
Query: 66 taagcccgtgccaaataagaacttgtactcagccactcctaccagcattggattatcaac 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 taagcccgtgccaaataagaacttgtactcagccactcctaccagcattggattatcaac 605
Query: 126 cctttctgagcacccaccacttgactgagttgcaagttttacttctgctcttgagctact 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 604 cctttctgagcacccaccacttgactgagttgcaagttttacttctgctcttgagctgct 545
Query: 186 ctgcacgtggcaggcagttcgacccttcccatcactacagataaagaatggaagtttccc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ctgcacgtggcaggcagttcgacccttcccatcactacagataaagaatggaagtttccc 485
Query: 246 ttccatcctctcccttcctctcctgtctcccccgctccccgcccccatcagcagttgctg 305
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttccattctctcccttcctctcctgtctcccccgctccccgcccccatcagcagttgctg 425
Query: 306 ttggtttcaggtatgccagaattctccaatgtgctcagagtttccatggctatacagtta 365
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttggtttcagggatgccagaattctccaatgtgctcagagtttccatggctatacagtta 365
Query: 366 aacaactcccaatatattgaaaacaacagtccacgtctacgtgctctgctcacttccgtt 425
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aacaattcccaatatattgaaaacaacagtccacgtctacgtgctctgctcacttccgtt 305
Query: 426 ttacgttccctatgacaatgtcacaacactctctcagctcttgatatttttggagatttc 485
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 304 ttacgttccctatgacaatgtcacaacactctctcagctcttgatatttgtggagatttc 245
Query: 486 tttttaatgttaggaaggtgcttttaaaaaaaaa-gctatttattttatgtatatgggtg 544
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 244 tttttaatgttaggaaggtgctttaaaaaaaaaaagctatttattttatgtatatgggtg 185
Query: 545 ttttgccacattcatgcacgtgtatgccactggaggccagatgagggtacctgatcccct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ttttgccacattcatgcacgtgtatgccactggaggccagatgagggtacctgatcccct 125
Query: 605 tggaccagtgttatagatcgttgtaagctgccatgtgagtgatgagaat 653
||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 124 tggaccagtgttatagatcgttgtaagctgccatgtgagtgctgagaat 76
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1054
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1044
Effective search space: 671292
Effective search space used: 671292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_m12.g1 MSMg01no293_m12.g1 CHROMAT_FILE:
MSMg01no293_m12.g1 PHD_FILE: MSMg01no293_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:18 2005
(283 letters)
>mm_chr15_99937864_99938546
Length = 683
Score = 514 bits (266), Expect = e-150
Identities = 276/282 (97%), Gaps = 6/282 (2%)
Strand = Plus / Plus
Query: 1 actcgggaggcagaggcaggcggatttctgagttcgaggccagcctggtctacaaagtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 actcgggaggcagaggcaggcggatttctgagttcgaggccagcctggtctacaaagtga 264
Query: 61 gttccaggacagccagggctacacagagaaaccctgtctcgaacccccccccccaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 265 gttccaggacagccagggctacacagagaaaccctgtctcgaacccccccc-----aaaa 319
Query: 121 caaacaaacaaacaaaccc-aaacttagtgtgtccctgctacatcaatgctcggcttagg 179
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caaacaaacaaacaaacccaaaacttagtgtgtccctgctacatcaatgctcggcttagg 379
Query: 180 aggaggatcttagtatttgctgcatgagtgagcgagcatcccagccctgtgtcatggtgc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aggaggatcttagtatttgctgcatgagtgagcgagcatcccagccctgtgtcatggtgc 439
Query: 240 tttccagttaaggtaagcattggtccttcatctttagaaaaa 281
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttccagttaaggtaagcattggtccttcatctttagaaaaa 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
