Query= MSMg01no298_c18.b1 MSMg01no298_c18.b1 CHROMAT_FILE:
MSMg01no298_c18.b1 PHD_FILE: MSMg01no298_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:47 2005
(627 letters)
>mm_chr15_23969185_23970210
Length = 1026
Score = 702 bits (363), Expect = 0.0
Identities = 381/387 (98%), Gaps = 1/387 (0%)
Strand = Plus / Minus
Query: 241 agcagatttatgcttaaggacattaaaagtatttaatattttgtcctactctcaatcaaa 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1026 agcagatttatgcttaaggacattaaaagtatttaaaattttgtcctactctcaatcaaa 967
Query: 301 atttcactgaagtaattttgttgagcctcaaggtagcaactcaaatatcaattaataaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 atttcactgaagtaattttgttgagcctcaaggtagcaactcaaatatcaattaataaga 907
Query: 361 gcaatattctaacacaatataatatattcagtgtgctattttgtcttttatttgctggga 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 906 gcaatattctaacacaatataatatattcagtgtgctattttgacttttatttgctggga 847
Query: 421 catgatagttgaaagatattgggaaaaccagaaagctttgtacaataaccacattgcaat 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 catgatagttgaaatatattgggaaaaccagaaagctttgtacaataaccacattgcaat 787
Query: 481 tcatacctgataataatctgagatctgagctaaggtgtcacaaaaaaaaatctgtcttat 540
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 786 tcatacctgataataatctgagatctgagctaaggtgtcac-aaaaaaaatctgtcttat 728
Query: 541 aaactagaataatcagtctacatgtttcatgtttcaaattgaagatgaagggacttggca 600
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 727 aaactagaataatcagtctacatgtttcatgtttcaaatcaaagatgaagggacttggca 668
Query: 601 ggacgcagcatagttgattgcttcaga 627
|||||||||||||||||||||||||||
Sbjct: 667 ggacgcagcatagttgattgcttcaga 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1026
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1016
Effective search space: 626872
Effective search space used: 626872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_c18.g1 MSMg01no298_c18.g1 CHROMAT_FILE:
MSMg01no298_c18.g1 PHD_FILE: MSMg01no298_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:48 2005
(661 letters)
>mm_chr15_23807267_23808327
Length = 1061
Score = 1247 bits (645), Expect = 0.0
Identities = 656/660 (99%)
Strand = Plus / Plus
Query: 1 ccatggagaaagaatcagagaaaaatgtgggtctgaggggcactacaagtactgggatca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 ccatggagaaagaatcagagaaaaatgtgggtctgaggggtactacaagtactgggatca 260
Query: 61 cacaatcaactgactaggactcatgaggccatgcagaatcgttacattacattcttagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaatcaactgactaggactcatgaggccatgcagaatcgttacattacattcttagac 320
Query: 121 aatagaggctgcaatagagacaatcctagggaattctctacagatttatattacaaatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatagaggctgcaatagagacaatcctagggaattctctacagatttatattacaaatac 380
Query: 181 aggaaaatgcagctgcaagttggttacgtgtctttaattctgaagtagcaacatttaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggaaaatgcagctgcaagttggttacgtgtctttaattctgaagtagcaacatttaaga 440
Query: 241 acctgaagatttggaagccataggttgccttcaaagtctaggtcagagtatcgtgtatct 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 441 acctgaagatttggaagccataggttgccttcaaagtctaggtcagagtatcttgtgtct 500
Query: 301 agatcatgtatatagatatagaattatataatatttgtgaaggagttaatataaaatatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agatcatgtatatagatatagaattatataatatttgtgaaggagttaatataaaatatt 560
Query: 361 cttcaatgacatctcttgaaacctacagattaatctgtaggtgcctttacaaacactttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcaatgacatctcttgaaacctacagattaatctgtaggtgcctttacaaacactttt 620
Query: 421 atttccttactatatcagacaacatataaaatgctgtatgtcagagcaataaacctattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atttccttactatatcagacaacatataaaatgctgtatgtcagagcaataaacctattt 680
Query: 481 cagcaaatacagagcgttatgactttgaaactgtaactctctgtatttcctttaatattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagcaaatacagagcgttatgactttgaaactgtaactctctgtatttcctttaatattc 740
Query: 541 aacacatatagtccatacttttcttccataaatttgatgtttaaaattaatctgcgcaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aacacatatagtccatacttttcttccataaatttgatgtttaaaattaatctgcgcaga 800
Query: 601 acattccacgaatactctaaagtctacagcagaagtacatgatacggntttctttcttgg 660
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 801 acattccacgaatactctaaagtctacagcagaagtacatgatacggttttctttcttgg 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
