XXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGAATGCGCGGAATTCATGA
CCATTTTCCAGCTAGGTTCCCAGTGCAAAGATTTCAGGTATGAGTCACTG
AGCCTGGTGCTAACTATGAATTTGTAGAGTGGGTTTTTCATCTGTAAACT
GGATTAAAATAATTGATTTAACAGACAGAGTAGAAAATCCTGCTCCTTAC
TTCCAATAGTTAATGACAAATTTTCATCTTAGTTTAGAAATCAAAAGCTT
TTTTTTTAATTCTTTTTTTATTAGGTATTTTCTTCATTTACATTTCCAAT
GCTATCCCAAAAGTCCCCCATGCCTTCCCCCTCCCTCCCACCCCCCACTC
CCACTTCAGCTGCACCAGCATAGAAACACAACCACTGCAGCCATAAAGAC
AGATTCGTGGTTCCTTATCAATAAAGCCAATATTTAAAAGGTTATGTAGT
CACAAAAATTAATTCATTTCTTAATAATACCTTTGTCATTTATATCTTGC
TATGAAATTTGTACAAATACAGACCTTAGCATTTATCTACTTTTTTAGCT
GATTTTCTGAATAGTTAATACTATATTTTAAAAACTAGAATGAAAAAATA
TAAATTGAATTGACTTCAAATCAACAGCCATCACTTTTCAAAAAAGCCCC
CTGTGATAGTGCAATGTTCTATTATGCGCTCTCCAAAGTGGCAGTTTCAA
GCTGTACATGAGCATTTTGACACTGACAATATTCTTCATGAGATTAAAAA
AGCGCGTC

CGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTTCCCGAATATCTGAATTTAGCAGCATGAACTTCTACAT
GGGTTCGGAAGCACGGATTTTCACGATACTTAGCCATCTCTGCGGAAGGG
GTGGGCTTAGGTGGGGTGGGGTGGGGGGTGGAGCCCCAATTCTCCTCTTT
TCTTACCTATTCCATTTTTACTCCCTTTTTTCTACTTTCCCTTCCCCTTT
CTTCTTTTCTACCCTTTCCTTTTTCCTCCTTTTTTCCCCCTTTCTTTCCC
TCCTCCCCCCCCAACTTTTTTTTTTTATACAACCCCCTTACCTTCCCCTC
CCCCCTTTTTTTTTTTCCCCCCCCCCCCCCCTCTTTTTATCTTCCCTCCT
CCCTCTTCTTTCTTTTCTCCCCCTCTATTATACTTTCCCCCCCCCTTTTT
TTCCCCCCCCCCTTTTTTTCCTCCTTTTCCCCCCCCCCCCCTTTCATTCT
TTCCCCCCCTTTTTTTATTCCCTCTCCTCTTTTTTCCCTTCCTCTCTCTC
CCCCTTTTTTTTTCCCCCCCTTTCCTTTTTCCCCTCTTTCTGTGCTTTTT
TCCCCGCTTCTTTCCCCCCCGCCCTTTTCCTCTTTTCCCCCCCCCTCCCC
TCTTCCTTTCTTTATTATCTCTTCTTCTCTTTCCCTCCCTCTTTTCCCCT
CTCCCTTCTTCCCCCCTCTCTCCGCCTTTGCCCCGCTTCTTCTCCCCCCC
CCCCATTTCCTCCCCCTCCCTTTTTTCCGCTTCCCCTCTTCCTTCTACCC
TTATT

Query= MSMg01no298_h23.b1 MSMg01no298_h23.b1 CHROMAT_FILE:
MSMg01no298_h23.b1 PHD_FILE: MSMg01no298_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:12 2005
         (583 letters)



>mm_chr15_40828206_40829188
          Length = 983

 Score = 1110 bits (574), Expect = 0.0
 Identities = 580/582 (99%), Gaps = 1/582 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   gaattcatgaccattttccagctaggttcccagtgcaaagatttcaggtatgagtcactg 62
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcatgaccatcttccagctaggttcccagtgcaaagatttcaggtatgagtcactg 262

                                                                       
Query: 63  agcctggtgctaactatgaatttgtagagtgggtttttcatctgtaaactggattaaaat 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agcctggtgctaactatgaatttgtagagtgggtttttcatctgtaaactggattaaaat 322

                                                                       
Query: 123 aattgatttaacagacagagtagaaaatcctgctccttacttccaatagttaatgacaaa 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aattgatttaacagacagagtagaaaatcctgctccttacttccaatagttaatgacaaa 382

                                                                       
Query: 183 ttttcatcttagtttagaaatcaaaagctttttttttaattctttttttattaggtattt 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttttcatcttagtttagaaatcaaaagctttttttttaattctttttttattaggtattt 442

                                                                       
Query: 243 tcttcatttacatttccaatgctatcccaaaagtcccccatgccttccccctccctccca 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcttcatttacatttccaatgctatcccaaaagtcccccatgccttccccctccctccca 502

                                                                       
Query: 303 ccccccactcccacttcagctgcaccagcatagaaacacaaccactgcagccataaagac 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ccccccactcccacttcagctgcaccagcatagaaacacaaccactgcagccataaagac 562

                                                                       
Query: 363 agattcgtggttccttatcaataaagccaatatttaaaaggttatgtagtcacaaaaatt 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agattcgtggttccttatcaataaagccaatatttaaaaggttatgtagtcacaaaaatt 622

                                                                       
Query: 423 aattcatttcttaataatacctttgtcatttatatcttgctatgaaatttgtacaaatac 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aattcatttcttaataatacctttgtcatttatatcttgctatgaaatttgtacaaatac 682

                                                                       
Query: 483 agaccttagcatttatctactttttt-agctgattttctgaatagttaatactatatttt 541
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 683 agaccttagcatttatctactttttttagctgattttctgaatagttaatactatatttt 742

                                                     
Query: 542 aaaaactagaatgaaaaaatataaattgaattgacttcaaat 583
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 aaaaactagaatgaaaaaatataaattgaattgacttcaaat 784


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space:   557529
Effective search space used:   557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)