Query= MSMg01no299_d05.b1 MSMg01no299_d05.b1 CHROMAT_FILE:
MSMg01no299_d05.b1 PHD_FILE: MSMg01no299_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:03 2005
(324 letters)
>mm_chr15_29073305_29074028
Length = 724
Score = 588 bits (304), Expect = e-172
Identities = 316/320 (98%), Gaps = 2/320 (0%)
Strand = Plus / Minus
Query: 5 gaattctttatgcaaataaatgcatttttaatttgatgttttaagaaagataaaatgcta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gaattctttatgcaaataaatgcatttttaatttgatgttttaagaaagataaaatgcta 655
Query: 65 tagaaagtcaagtaaattttacaaatctatcattacccagacagaataaattatattaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tagaaagtcaagtaaattttacaaatctatcattacccagacagaataaattatattaat 595
Query: 125 gaatgtttatagtattatataaactagataaacaaaaattttaattttatacatctataa 184
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gaatgtttatagtgttatataaactagataaacaaaaattttaattttatacatctataa 535
Query: 185 tattaaaaatagtgccagtgaaatggcttaggtggtataagtctttcataagaaaacttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tattaaaaatagtgccagtgaaatggcttaggtggtataagtctttcataagaaaacttt 475
Query: 245 gtggcctaaagttgatctttgaagcccacttaaaaaatga-cctcagtgacacagctctg 303
||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 474 gtgacctaaagttgatctttgaagcccacttaaaaaatgaccct-agtgacacagctctg 416
Query: 304 caaagttgtcctctgactgg 323
||||||||||||||||||||
Sbjct: 415 caaagttgtcctctgactgg 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no299_d05.g1 MSMg01no299_d05.g1 CHROMAT_FILE:
MSMg01no299_d05.g1 PHD_FILE: MSMg01no299_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:36:03 2005
(249 letters)
>mm_chr15_28899048_28899696
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 acctttggatagtttttatttggaacaaaaggagaagcaatagcattataggaaagggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctttggatagtttttatttggaacaaaaggagaagcaatagcattataggaaagggag 260
Query: 61 ggctatgagatttaattaaagcatcactttaaagagcaacattgtaataattagcatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctatgagatttaattaaagcatcactttaaagagcaacattgtaataattagcatttg 320
Query: 121 gctgcttagcttctttaattaggactgcattttattctcccttatttcagagagtaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgcttagcttctttaattaggactgcattttattctcccttatttcagagagtaataa 380
Query: 181 ttgagtaatccttgagtgtgtaactttatagcatcctgtttggctagatggctagtactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgagtaatccttgagtgtgtaactttatagcatcctgtttggctagatggctagtactc 440
Query: 241 atggtgtgt 249
|||||||||
Sbjct: 441 atggtgtgt 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
