CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGA
ATTCTCCTGGAATATCATAAACATGCCCATTTCCTTTATATTGGACACCA
GCTGCCATCAGACATGTCTCCCTCCAAGCATAGCTCCTGAACCAATGAGT
GTGTGGGGACTGAGCATGGGGAGTGTGTATAGGAATGAGCATTCGTGAAC
TGTTCTGGGCACATCAGTGACTCAGTAAGGACTGTGTCATTGAAAAGCTC
CCAATTGATATGAGTGACAACTCAAAGAGCTGTGATTTCTTTTGAGTCCC
AGATCCATCAACCTTTAATTGTCTCTTTAGCACTGTCCATGCAGTTGGAA
TAGGAGAATAGTGGCTGGAGTCCCTGGTGAGAGAGATGTCTGTGTTCTGC
GGTACAACAGAATATTACTGGGGCTGATGAAGTGGTCTTTTGATAAGGTC
TTGCCTCTGATCACACTAACTCTGACTTCAAGCCAGCAGCAGTCATGACA
TGCCTAGAGGATGGAATCTTGCCAACAATTTCACTGATGGTATTGCATCT
CACCATCTTTCTAAACCCGTCAGGGTGAACAATGGAAAATACATATTTTG
GTATGTATGACCTGCTATGGAGGTCATGAAATTGTATGTTTTATTACCAA
TCCTGGATGTTACTTCACAAAATGCGCTGAGAGAAAGGGCAGTGAAGTTG
AGTAGCTGACTGCACACACCATGTCTTGGCACAGGGCTGGATCCTAA

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTGGTGCTTGCTTTCATCTTTCTTTTTT
TTAATTAATTTATTTATTGAGTTTATCCTCCAGTATTAGCCCACCTCTGC
TCCCCATCCATACTCCCCCCTCCATAGCTCTTCCTTCCGTTTCCCCTCCA
CTTCTCCTTTGAGAAAGGAGACCCCCAACACTGGGTATTAACGCCCCCCC
CCACACACACACACATCAGTCATTGTAAGACTAGGTGTATTCTCTCTCAC
TGAAGCCAGACAAAGTTAGGATAATGGAATCCACAGATAATAAATTCAGG
GACTCCACGGGAATATCTTTTGACCCCACCCCCTTGGGCCCTTGGGAGTT
CAAAAGAAGGAACCAACCAAAAAGTGAGAATGGACTGAACCTAACTCCCT
CCCCTGCCCATATGTAGCAGATGTGCAGCTTGATCTTCATGTGGGTTCCC
AACAACTAGAGCAGGGGCTATCTCTGAAACTGTTGTCTATGTGCCTGTGG
ATCATATTCCCCTAACATGGCCAACTTCTCTGGCTTCAGTAGCAGAGAAT
GTGCTTAGTACTGCAAAGACTTTATGTGCTGGGAAGGGGGAAAAGGAGAG
GTGTGGTGTGTGAGGTCACNAAGAGGGAGGGATGATGGCTTATTGCCCAT
TCCTTATAAATATACGTGGTCTGTTATGGTGCGGTTGTAGGCGCTTGCGG

Query= MSMg01no301_i22.b1 MSMg01no301_i22.b1 CHROMAT_FILE:
MSMg01no301_i22.b1 PHD_FILE: MSMg01no301_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:59 2005
         (677 letters)



>mm_chr15_60744727_60745803
          Length = 1077

 Score = 1286 bits (665), Expect = 0.0
 Identities = 674/677 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acatgcccatttcctttatattggacaccagctgccatcagacatgtctccctccaagca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatgcccatttcctttatattggacaccagctgccatcagacatgtctccctccaagca 260

                                                                       
Query: 61  tagctcctgaaccaatgagtgtgtggggactgagcatggggagtgtgtataggaatgagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagctcctgaaccaatgagtgtgtggggactgagcatggggagtgtgtataggaatgagc 320

                                                                       
Query: 121 attcgtgaactgttctgggcacatcagtgactcagtaaggactgtgtcattgaaaagctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attcgtgaactgttctgggcacatcagtgactcagtaaggactgtgtcattgaaaagctc 380

                                                                       
Query: 181 ccaattgatatgagtgacaactcaaagagctgtgatttcttttgagtcccagatccatca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaattgatatgagtgacaactcaaagagctgtgatttcttttgagtcccagatccatca 440

                                                                       
Query: 241 acctttaattgtctctttagcactgtccatgcagttggaataggagaatagtggctggag 300
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 acctttaattgtctctttagcactgttcatgcagttggaataggagaatagtggctggag 500

                                                                       
Query: 301 tccctggtgagagagatgtctgtgttctgcggtacaacagaatattactggggctgatga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 tccctggtgagagagatgtctgtgttctgcggtacaacagaatattactagggctgatga 560

                                                                       
Query: 361 agtggtcttttgataaggtcttgcctctgatcacactaactctgacttcaagccagcagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtggtcttttgataaggtcttgcctctgatcacactaactctgacttcaagccagcagc 620

                                                                       
Query: 421 agtcatgacatgcctagaggatggaatcttgccaacaatttcactgatggtattgcatct 480
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 agtcatgacatgcctagaggatggaatcttgccaacaatttcactgatgggattgcatct 680

                                                                       
Query: 481 caccatctttctaaacccgtcagggtgaacaatggaaaatacatattttggtatgtatga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caccatctttctaaacccgtcagggtgaacaatggaaaatacatattttggtatgtatga 740

                                                                       
Query: 541 cctgctatggaggtcatgaaattgtatgttttattaccaatcctggatgttacttcacaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cctgctatggaggtcatgaaattgtatgttttattaccaatcctggatgttacttcacaa 800

                                                                       
Query: 601 aatgcgctgagagaaagggcagtgaagttgagtagctgactgcacacaccatgtcttggc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aatgcgctgagagaaagggcagtgaagttgagtagctgactgcacacaccatgtcttggc 860

                            
Query: 661 acagggctggatcctaa 677
           |||||||||||||||||
Sbjct: 861 acagggctggatcctaa 877


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space:   711689
Effective search space used:   711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)