Query= MSMg01no305_i22.b1 MSMg01no305_i22.b1 CHROMAT_FILE:
MSMg01no305_i22.b1 PHD_FILE: MSMg01no305_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:38 2005
(414 letters)
>mm_chr15_12791917_12792730
Length = 814
Score = 694 bits (359), Expect = 0.0
Identities = 393/415 (94%), Gaps = 20/415 (4%)
Strand = Plus / Minus
Query: 5 gaattccatctacttaataaagtaaaaagtaatgacagaaagaagcacaatggagcaaga 64
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 410 gaattccatctacttaataaagtaaaaagtaatgacagaaagaagcaaaatggagcaaga 351
Query: 65 tttgagactcagccttcagtggaaaagttctatatggtgactttctgactgcaggcaagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tttgagactcagccttcagtggaaaagttctatatggtgactttctgactgcaggcaagc 291
Query: 125 aacacagtgaaactcactcactaggttcccaggacactcagcccaggtaaagaactgcca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aacacagtgaaactcactcactaggttcccaggacactcagcccaggtaaagaactgcca 231
Query: 185 cgctcctccagaaactgctacag-----------caacctaagaccagatgggcactgca 233
||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 230 cgctcctccagaaactgctacagcaatcaccgatcaacctaagaccagatgggcactgca 171
Query: 234 attcccaaggctgccaacttcaaaaggggagggaggattctgatgcaatccagagcatcc 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 attcccaaggctgccaacttcaaaaggggagggaggattctgatgcaatccagagcatcc 111
Query: 294 atttagactgacgcccagaaaaccatccccagtgaccagataaccatcacaagtccttgt 353
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atttagactgacgcccaaaaaaccatccccagtgaccagataaccatcacaagtccttgt 51
Query: 354 gtcagac----tttttctctgaatacagatacagccctggagtttaaaagcagag 404
||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 50 gtcagaccaag----tctctgaatacagatacagccctggagttt-aaagcagag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_i22.g1 MSMg01no305_i22.g1 CHROMAT_FILE:
MSMg01no305_i22.g1 PHD_FILE: MSMg01no305_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:38 2005
(348 letters)
>mm_chr15_12610579_12611321
Length = 743
Score = 600 bits (310), Expect = e-176
Identities = 337/348 (96%), Gaps = 5/348 (1%)
Strand = Plus / Plus
Query: 1 gcatccatgtgggtatttttaacaaggcataaaacttgcaattctattaaaaacacatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcatccatgtgggtatttttaacaaggcataaaacttgcaattctattaaaaacacatgt 260
Query: 61 ctcttgtttcaaagcacagttagcaacagacactgcgaatgggcaaacataccaccaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcttgtttcaaagcacagttagcaacagacactgcgaatgggcaaacataccaccaacc 320
Query: 121 agggggatactctccctcagttccgtgtctcccattctgcagttctggggactttggatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agggggatactctccctcagttccgtgtctcccattctgcagttctggggactttggatc 380
Query: 181 tttctttatttcctgaagaaatgcctttcttttggtggtaataaacttggagagttcctt 240
||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 ttt----atttcctgaagaaacgcctttcttttggtggtaataaacttggagaattcctt 436
Query: 241 gtggcttttttttttttcctctgaaacctggaagagacgtgctactgctgacaaacactc 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gtggcttttttttttt-cctctgaaacctggaagagacgtgctactgctgacaaacactc 495
Query: 301 cttgtttccatgtgtgctattatttctcagaatgaagacaaagattga 348
| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cctggacccatgtgtgctattatttctcagaatgaagacaaagattga 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 743
Length adjustment: 9
Effective length of query: 339
Effective length of database: 734
Effective search space: 248826
Effective search space used: 248826
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
