Query= MSMg01no306_c08.b1 MSMg01no306_c08.b1 CHROMAT_FILE:
MSMg01no306_c08.b1 PHD_FILE: MSMg01no306_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:50 2005
(332 letters)
>mm_chr15_92595652_92596383
Length = 732
Score = 565 bits (292), Expect = e-165
Identities = 317/328 (96%), Gaps = 6/328 (1%)
Strand = Plus / Plus
Query: 5 gaattccttcatcccgtcatataaacatatacaatattatgtgtatacaacagaatatac 64
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 205 gaattccttcatcccgtcatataaacacatacaatataatgtgtatacaacagaatatac 264
Query: 65 agaaacacacatacacaaagtttgtctatttttcagctagtcaggagactacaatacaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agaaacacacatacacaaagtttgtctatttttcagctagtcaggagactacaatacaaa 324
Query: 125 ctgccaggctataaaaaaagaaagttaaaaccgacttgtattcgtgagccaatagaaaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgccaggctataaaaaaagaaagttaaaaccgacttgtattcgtgagccaatagaaaag 384
Query: 185 tcaaggccatctaatcttaaggtttgtattatcaagtcttctacagtcttcagatgggct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcaaggccatctaatcttaaggtttgtattatcaagtcttctacagtcttcagatgggct 444
Query: 245 ttcaaatgaagccaggtccacagcacctgctagagggttggttttttgtttgttttggtt 304
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 445 ttcagatgaagccaggtccacagcacctaatagagggttggttttttgtttgttttg--- 501
Query: 305 tgttttgttgttttttgggttttgttgt 332
||||||||||||||||||||| ||||
Sbjct: 502 --ttttgttgttttttgggtttt-ttgt 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_c08.g1 MSMg01no306_c08.g1 CHROMAT_FILE:
MSMg01no306_c08.g1 PHD_FILE: MSMg01no306_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:50 2005
(294 letters)
>mm_chr15_92667108_92667801
Length = 694
Score = 499 bits (258), Expect = e-146
Identities = 285/298 (95%), Gaps = 10/298 (3%)
Strand = Plus / Minus
Query: 1 tccttctccttctccttctccttctccttctccttctccttctccttctccttctccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tccttctccttctccttctccttctccttctccttctccttctccttctccttctccttc 601
Query: 61 tccttctccttctccttctctttctc--tccttctccttctttctccttctcctcctcct 118
|||||||||||||||||||| ||||| |||| |||| || ||||| |||||||||||
Sbjct: 600 tccttctccttctccttctccttctccttcctcctcc-tc---ctcctcctcctcctcct 545
Query: 119 cct----cctccccctcctctccccctccctcccctccctctccttctcctttagaacct 174
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cctcccccctccccctcctctccccctccctcccctccctctccttctcctttagaacct 485
Query: 175 attatttgtgtcactcctcttttcatataatttccagaatgttctgtttatggatggttg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 attatttgtgtcactcctcttttcatataatttccagaatgttctgtttatggatggttg 425
Query: 235 tagatttaacattttttctttgagtcatccaacttccccatcttgtctgaaagcactg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tagatttaacattttttctttgagtcatccaacttccccatcttgtctgaaagcactg 367
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
