Query= MSMg01no309_d19.b1 MSMg01no309_d19.b1 CHROMAT_FILE:
MSMg01no309_d19.b1 PHD_FILE: MSMg01no309_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:46 2005
(319 letters)
>mm_chr15_84068565_84069284
Length = 720
Score = 580 bits (300), Expect = e-170
Identities = 312/316 (98%), Gaps = 1/316 (0%)
Strand = Plus / Minus
Query: 4 ggaattc-aagcacggtgctcctaaggatcactggatgtgatggctgattgactttctgg 62
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggaattcaaagcacggtgctcctaaggatcactggatgtgatggctgattgactttctgg 460
Query: 63 ggaaacccgggaccagtaggcagcagaatcgtggtgttagaatagaagaaaaggcctagg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ggaaacccgggaccagtaggcagcagaatcgtggtgttagaatagaagaaaaggcctagg 400
Query: 123 tctgagaggtagagatggaaagaggcgaacttctcagggccaagaggcaccttttatttt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tctgagaggtagagatggaaagaggcgaacttctcagggccaagaggcaccttttatttt 340
Query: 183 attttttttagctgaagcctggttttttgaagtcttaagaggcggccaagaaaagcaccc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 attttttttagctgaagcctggttttttgaagtcttaagaggcggccaagaaaagcaccc 280
Query: 243 actaccgatccagatgttccccggggaccacagaactcatctggatacttgaagcaatcc 302
||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||
Sbjct: 279 actaccgatccagatgttccccggggaccacagaactcaacaggacacttgaagcaatcc 220
Query: 303 ctgggtttgatgttat 318
||||||||||||||||
Sbjct: 219 ctgggtttgatgttat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no309_d19.g1 MSMg01no309_d19.g1 CHROMAT_FILE:
MSMg01no309_d19.g1 PHD_FILE: MSMg01no309_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:46 2005
(293 letters)
>mm_chr15_83894641_83895335
Length = 695
Score = 485 bits (251), Expect = e-141
Identities = 283/297 (95%), Gaps = 8/297 (2%)
Strand = Plus / Plus
Query: 1 ctttttcctccaattcataggctggacagaaaacacccattcacctacaccccaggagcc 60
||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 201 ctttttcctcccattcataggctggacagaaaacacccattcacatacacccaaggagcc 260
Query: 61 aacggcag-----ttttccactccctggagcttaggcaaagaaatgtttattgaactgaa 115
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacggcaggttcgttttccactccctggagcttaggcaaagaaatgtttattgaactgaa 320
Query: 116 ggcaacggattaaagaccaaaatgaagtgtggtttgtatagataggatttatttaccgta 175
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 ggcaacggattaaagaccaaaatgaagtgtggtttgtaaagataggatttatttaccgta 380
Query: 176 tttctctaagttcactattcaaggacatagatacaatttaagagaaataggtgtcttccc 235
||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 381 tttctctaagttcactattcaagga--tagatacaatttaagagaaataggtgttttccc 438
Query: 236 cagggtgatatagaagtctctttggaagaggcagacttgtggaaagtaaatattttc 292
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cagggtgatatagaagcc-ctttggaagaggcagacttgtggaaagtaaatattttc 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 695
Length adjustment: 9
Effective length of query: 284
Effective length of database: 686
Effective search space: 194824
Effective search space used: 194824
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
