Query= MSMg01no318_i24.b1 MSMg01no318_i24.b1 CHROMAT_FILE:
MSMg01no318_i24.b1 PHD_FILE: MSMg01no318_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:46 2005
(327 letters)
>mm_chr15_83814409_83815135
Length = 727
Score = 503 bits (260), Expect = e-147
Identities = 306/322 (95%), Gaps = 4/322 (1%)
Strand = Plus / Plus
Query: 5 gaattctccagacacatatcctacacttttcttctcttccttgttggaagagggaggaca 64
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccagacacaaatcatacacttttcttctcttccttgttggaagagggaggaca 264
Query: 65 gcagatcccaggagccaacaggctccctcctcaccagacagcaggagcaatgagaccttc 124
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcagatcccaggacccaagaggctccctcctcaccagacagcaggagcaatgagaccttc 324
Query: 125 ctgtaagaagtacagagacaaggatctggctagtgagccagcaagactcacatttctgaa 184
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |
Sbjct: 325 ctgtaagaagtacagagacaaggatctggctagtgagcaagtgagactcacatttctgga 384
Query: 185 accagggactctagagtgtggagggtggggggatggtaagcaggtgactcttataactga 244
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 accaggaaccctagagtgtggagggtggggggatggtaagcaggtgactcttataactga 444
Query: 245 cagaagcctatcaccacaggggactgaaaccttagcccattta-a-gcacacagtcttca 302
||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct: 445 cagaagcctatcaccacaggggactgaaaccttagcccac--agacgcacacagtcttca 502
Query: 303 aagagcaaatggcagagggagt 324
||||||||||| ||||||||||
Sbjct: 503 aagagcaaatgacagagggagt 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_i24.g1 MSMg01no318_i24.g1 CHROMAT_FILE:
MSMg01no318_i24.g1 PHD_FILE: MSMg01no318_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:46 2005
(300 letters)
>mm_chr15_83963522_83964221
Length = 700
Score = 565 bits (292), Expect = e-165
Identities = 298/300 (99%)
Strand = Plus / Minus
Query: 1 ctggctgggtactgcctctagaaatagccctgaagtgggggtatttctgtaactagagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctggctgggtactgcctctagaaatagccctgaagtgggggtatttctgtaactagagag 441
Query: 61 gcaggagccacagcgcactggcctcctgggtacttgtattgagccagggaccagagacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcaggagccacagcgcactggcctcctgggtacttgtattgagccagggaccagagacca 381
Query: 121 gggacacagcttgcttaaatccattcagcacccaccttcccagtgaccttggagtctgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gggacacagcttgcttaaatccattcagcacccaccttcccagtgaccttggagtctgag 321
Query: 181 aattcaccatacttaaaactggctcttccttgacgattcatggggagaattaataacagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aattcaccatacttaaaactggctcttccttgacgattcatggggagaattaataacagt 261
Query: 241 agaaagcctcttggtgagagaatataggacgaggtggatgcttgtttgttttttgagaca 300
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aggaagcctcttggggagagaatataggacgaggtggatgcttgtttgttttttgagaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 700
Length adjustment: 9
Effective length of query: 291
Effective length of database: 691
Effective search space: 201081
Effective search space used: 201081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
