Query= MSMg01no318_k06.b1 MSMg01no318_k06.b1 CHROMAT_FILE:
MSMg01no318_k06.b1 PHD_FILE: MSMg01no318_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:51 2005
(336 letters)
>mm_chr15_47634613_47635346
Length = 734
Score = 545 bits (282), Expect = e-159
Identities = 319/334 (95%), Gaps = 8/334 (2%)
Strand = Plus / Minus
Query: 5 gaattccaaaaaagt---ttacctttatctaaatggtattctcttctgcaatatgatata 61
||||||||||| ||| || |||| ||||||||||||||||||||||||||||||||
Sbjct: 553 gaattccaaaagagtagatt---tttacctaaatggtattctcttctgcaatatgatata 497
Query: 62 aattagtatgtaaagagccaagttttgtggaatgagaatatatttttttgtataccagaa 121
|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 496 aattagtatgtaaagagccaagctttgtggaatgagaatata-ttttttgtataccagaa 438
Query: 122 aatatcttgtgccacataaatatttgacatagatttgtacatgatttttctataagcata 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aatatcttgtgccacataaatatttgacatagatttgtacatgatttttctataagcata 378
Query: 182 attccttaagaaattcatttttaatttatagttgaacaataaattattactgaatttcct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 377 attccttaagaaattcatttttaatttatagttgaacaataaattattactgagtttcct 318
Query: 242 ctgccttgttggttcttttccttggttttgtattacatttataagaaaacgttcatagtt 301
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 317 ctgccttgttggttcttttccttggttttgtattacatttagaagaaaacgttcatagtt 258
Query: 302 aaatgagggattgtatctagttattgttgattta 335
|||||||||||||||||||| | ||||||||||
Sbjct: 257 aaatgagggattgtatctag-gaatgttgattta 225
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 734
Length adjustment: 9
Effective length of query: 327
Effective length of database: 725
Effective search space: 237075
Effective search space used: 237075
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_k06.g1 MSMg01no318_k06.g1 CHROMAT_FILE:
MSMg01no318_k06.g1 PHD_FILE: MSMg01no318_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:51 2005
(294 letters)
>mm_chr15_47481607_47482300
Length = 694
Score = 534 bits (276), Expect = e-156
Identities = 288/292 (98%)
Strand = Plus / Plus
Query: 1 cacagtgaccggctgaaatttgtcaaaaaggagtcttaataaagtgcctgtatacagtat 60
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 cacagtgacccgctgaaatttgtcaaaaaggagtcttaataaagtgcctgtacacagtat 260
Query: 61 ttatttgtgatttgtatacataattagctttattaaacattaatgttatcaaatattaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatttgtgatttgtatacataattagctttattaaacattaatgttatcaaatattaaa 320
Query: 121 tgttaattaagattatcaaataaatattattaaatattcataaagtactaaagaacttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 tgttaattaagattatcaaataaatattattaaatattcataaagtactaaagaatttac 380
Query: 181 aggtaactaagacacattctgaaaaacatcaagaaattaaaaattgaaaaaaaatgccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtaactaagacacattctgaaaaacatcaagaaattaaaaattgaaaaaaaatgccta 440
Query: 241 gtgaattgatctaaaaatacagtattttgatatataaaaattaatatctatc 292
||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 gtgaattgatctaaaaatacagtattttggtatataaaaattaatatctatc 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
