Query= MSMg01no322_h10.b1 MSMg01no322_h10.b1 CHROMAT_FILE:
MSMg01no322_h10.b1 PHD_FILE: MSMg01no322_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:26 2005
(289 letters)
>mm_chr15_50546569_50547257
Length = 689
Score = 522 bits (270), Expect = e-153
Identities = 282/286 (98%)
Strand = Plus / Plus
Query: 1 aaaaaaacaaataaaaacctcccagaattaaagggagtaataatgaaccaaagggtgggt 60
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 aaaaaaacaaaaaaaaacctcccagaattaaagggagtaataatgaagcaaagggtgggt 260
Query: 61 ggaaaactgggcattttccaaactcttggtaagtcacttgttaagtgtgtggttactgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaaaactgggcattttccaaactcttggtaagtcacttgttaagtgtgtggttactgta 320
Query: 121 tctgagttagacacagtctctaaggacaattaaaccctaaactaagcaaaatacaatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgagttagacacagtctctaaggacaattaaaccctaaactaagcaaaatacaatggt 380
Query: 181 ctctgcaaaagattttcaattccaatagcaaaaaccctgacgagcacgttagaagagtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctgcaaaagattttcaattccaatagcaaaaaccctgacgagcacgttagaagagtta 440
Query: 241 ttcttattgtgcacatcgcactgatgatgatggcttttgcctacca 286
|||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcttaaagtgcacatcgcactgatgatgatggcttttgcctacca 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no322_h10.g1 MSMg01no322_h10.g1 CHROMAT_FILE:
MSMg01no322_h10.g1 PHD_FILE: MSMg01no322_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:26 2005
(220 letters)
>mm_chr15_50703028_50703649
Length = 622
Score = 362 bits (187), Expect = e-104
Identities = 213/227 (93%), Gaps = 12/227 (5%)
Strand = Plus / Minus
Query: 1 gctccttttgcttctatggctgactc-cttgtaagattcccattcc-atgtatctgcctc 58
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 422 gctccttttgcttctatggctgactcacttgtaagattcccattccaatgtatctgcctc 363
Query: 59 ttccttagagaccaaacattccagagcttcccaggaaccttagctaattgcatttttcaa 118
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttccttagagaccaaacattccaaagcttcccaggaaccttagctaattgcatttttcaa 303
Query: 119 gcatactgttctaatgtcaccttttatctatta-----ttttttttacaaatcctttgaa 173
||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 302 gcatactgttctaatgtcaccttttatctattagcaac-----tttacaaatcctttgaa 248
Query: 174 ggagattcttggatttgtgaagtggtgtgtctgtctgcctgcatttt 220
||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 247 ggagattcttggatttgtgaagtggtgtgtctgtctgcctgtatttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 622
Length adjustment: 9
Effective length of query: 211
Effective length of database: 613
Effective search space: 129343
Effective search space used: 129343
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
