Query= MSMg01no324_e22.b1 MSMg01no324_e22.b1 CHROMAT_FILE:
MSMg01no324_e22.b1 PHD_FILE: MSMg01no324_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:35 2005
(671 letters)
>mm_chr15_48167307_48168377
Length = 1071
Score = 1056 bits (546), Expect = 0.0
Identities = 561/566 (99%), Gaps = 1/566 (0%)
Strand = Plus / Minus
Query: 106 ttctagtgaatttttaaatgaaatattaatcatttttctaagtgttaccaaaagctaaga 165
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 ttctagtgaatttttaaatgaaatattaatcatttttctaagtgttaccaaaagctaag- 1013
Query: 166 aaaaaaaaattccccacaacaacctccgtagcaacttctgataccggaaaatatctttag 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 aaaaaaaaattccccacaacaacctccgtagcaacttctgataccggaaaatatctttag 953
Query: 226 catggaagatgttttttgataagtttgtgtttgatttctctattcaaaatttaagacgtc 285
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 catggaagatgttttttgacaagtttgtgtttgatttctctattcaaaatttaagacgtc 893
Query: 286 cccagtaaaagggttcactataatgacaacagtctgtgttttggggaccactagaacttc 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 cccagtaaaagggttcactataatgacaacagtctgtgttttggggaccactagaacttc 833
Query: 346 cccaccaatgttgaattatacacttaattacatatatactgtggtaaaaggtaaaagtgt 405
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 cctagtaatgttgaattatacacttaattacatatatactgtggtaaaaggtaaaagtgt 773
Query: 406 atatattcttggaattgccttttctgatagaaatatgatgttttacgtattggttgttta 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 atatattcttggaattgccttttctgatagaaatatgatgttttacgtattggttgttta 713
Query: 466 aactccaatgtcatttgacagtatataaagactaatctcatatttatagttgatatttaa 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 aactccaatgtcatttgacagtatataaagactaatctcatatttatagttgatatttaa 653
Query: 526 aagaaatatgataatctgttttaatcattttgcaattattaattcacaatgtgaatcaac 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aagaaatatgataatctgttttaatcattttgcaattattaattcacaatgtgaatcaac 593
Query: 586 atagtatccctattttacaggctatattaattcattttaatttatatgtatctatatatc 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 atagtatccctattttacaggctatattaattcattttaatttatatgtatctatatatc 533
Query: 646 ttataggcacagatggaactaagagt 671
||||||||||||||||||||||||||
Sbjct: 532 ttataggcacagatggaactaagagt 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_e22.g1 MSMg01no324_e22.g1 CHROMAT_FILE:
MSMg01no324_e22.g1 PHD_FILE: MSMg01no324_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:35 2005
(663 letters)
>mm_chr15_47986562_47987624
Length = 1063
Score = 1266 bits (655), Expect = 0.0
Identities = 661/663 (99%)
Strand = Plus / Plus
Query: 1 ctagccagaggaattggacaacaaataaagatcaaagtgatacaaataggaatttttata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagccagaggaattggacaacaaataaagatcaaagtgatacaaataggaatttttata 260
Query: 61 atataaaaaaatcatccgtcttgatacttattatttgtgtatatacatatgcacatgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atataaaaaaatcatccgtcttgatacttattatttgtgtatatacatatgcacatgtat 320
Query: 121 tagtaccaaatgtttattatcttcaccttaaatatttcacagacttcctcagaaaatata 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 tagtaccaaatgtttattatcttcaccttaaatatttcccagacttcctcagaaaatata 380
Query: 181 tgaatactgtacaaaataataaaaacataattgttataatctatgtctgccaattcaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaatactgtacaaaataataaaaacataattgttataatctatgtctgccaattcaagt 440
Query: 241 taggcaaattaattgtctccaagtcagcttatcatcattaagcatactctaccctgaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taggcaaattaattgtctccaagtcagcttatcatcattaagcatactctaccctgaaaa 500
Query: 301 gaaatatctttaaattatgtcttgatcatggattttcaatatggccaaagaattttggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaatatctttaaattatgtcttgatcatggattttcaatatggccaaagaattttggtg 560
Query: 361 agacattggtaacagtgttttgagtgatgctgggaaataaataaaccttcacaaaaaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agacattggtaacagtgttttgagtgatgctgggaaataaataaaccttcacaaaaaatg 620
Query: 421 ggaattcaagcacaaattgaaaatagaaagtaatttgcctcagtatgaaatctgcatctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 621 ggaattcaagcacaaattgaaaatagaaagtaatttgcctcagtatgaaatctgcgtctg 680
Query: 481 acctacgtatacacaatgtgcattcactatggtgtatacaccataccagccttgattgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acctacgtatacacaatgtgcattcactatggtgtatacaccataccagccttgattgtc 740
Query: 541 ctggtaaatattcagattgttcttatatactacactgccctgctttgtgtgtttgtcggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctggtaaatattcagattgttcttatatactacactgccctgctttgtgtgtttgtcggt 800
Query: 601 tatgaattatgccgatatccagtgcctgtagaatacacatggtaaattaatcccctgcta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tatgaattatgccgatatccagtgcctgtagaatacacatggtaaattaatcccctgcta 860
Query: 661 ctt 663
|||
Sbjct: 861 ctt 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
