Query= MSMg01no324_f24.b1 MSMg01no324_f24.b1 CHROMAT_FILE:
MSMg01no324_f24.b1 PHD_FILE: MSMg01no324_f24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:41 2005
(649 letters)
>mm_chr15_91775194_91776242
Length = 1049
Score = 1208 bits (625), Expect = 0.0
Identities = 643/649 (99%)
Strand = Plus / Plus
Query: 1 acaaaggttggcttttttgattggatttgtacgaagtaggctgattttggtaaatgcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaaaggttggcttttttgattggatttgtacgaagtaggctgattttggtaaatgcttg 260
Query: 61 cttgaaagtagaactgaaaccaccattattgtcagtagctacacatcctttatgggaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgaaagtagaactgaaaccaccattattgtcagtagctacacatcctttatgggaggc 320
Query: 121 aggtggcaaaatggtcccagcccttccaccccttcacgaataccctctgctacatgaagt 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggtggcaaaatggtcctagcccttccaccccttcacgaataccctctgctacatgaagt 380
Query: 181 ctgtttgaatccttgagtctggagcttaaatggagacctactctggagggacaagcagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtttgaatccttgagtctggagcttaaatggagacctactctggagggacaagcagag 440
Query: 241 acctcaaaatagatctagatggttggatgattgcccttcttctcttgagactctgtccat 300
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acctcaaattagaactagatggttggatgattgcccttcttctcttgagactctgtccat 500
Query: 301 cctatgaccaaatctagactagcctcctgaaggatgagcaccaccacatgcatgtctcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctatgaccaaatctagactagcctcctgaaggatgagcaccaccacatgcatgtctcca 560
Query: 361 tgatggctgagcccccacagtcaccatcacaggtgaagcctcaaatgggtgaaattatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgatggctgagcccccacagtcaccatcacaggtgaagcctcaaatgggtgaaattatac 620
Query: 421 tcatgtatttagtcccaaccagctcacaggagtcccaaacagccacctgtgctctacatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatgtatttagtcccaaccagctcacaggagtcccaaacagccacctgtgctctacatc 680
Query: 481 attgtggaaagcaataaatgctatagtgttccaagctgctaacaccagggttgtttcata 540
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 681 attgtggaaagcaataaatgctatagtgttccaagctgctaacaccgggggtgtttcata 740
Query: 541 atgccgccaaggccaagcaatgaccagcagttcatagcaggaaaaataaaagtgcttagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgccgccaaggccaagcaatgaccagcagttcatagcaggaaaaataaaagtgcttagt 800
Query: 601 gacgataatatgtagttttataatacactggggagtaaaccttatacaa 649
||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gacaataatatgtagttttataatacactggggagtaaaccttatacaa 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_f24.g1 MSMg01no324_f24.g1 CHROMAT_FILE:
MSMg01no324_f24.g1 PHD_FILE: MSMg01no324_f24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:41 2005
(661 letters)
>mm_chr15_91988729_91989790
Length = 1062
Score = 1062 bits (549), Expect = 0.0
Identities = 609/629 (96%), Gaps = 1/629 (0%)
Strand = Plus / Minus
Query: 1 gaaggcttcaatatgtcttgaatgaaagtgagtgcagagagaggactacaacactcccag 60
||||||||||||| ||| |||||||||| |||||||||||| |||||||||||| |||||
Sbjct: 629 gaaggcttcaataagtcctgaatgaaagagagtgcagagaggggactacaacacccccag 570
Query: 61 ggtaaaacaaagtttgaggctgtaataaagacccagtgtcccttctcctgaagtctggct 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ggtaaaacaaagcttgaggctgtaataaagacccagtgtcccttctcctgaagtctggct 510
Query: 121 attccttgaggagggtggagggggtgacgcttaaccaatcattccagaaggatggaaaag 180
||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 509 attccttgaggagggtggaggggatgacatttaaccaatcattccagaaggatggaaaag 450
Query: 181 agacatggtcatttcaggtaatttgatcgcctggcagatcaaaggactttcccacatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agacatggtcatttcaggtaatttgatcgcctggcagatcaaaggactttcccacatttt 390
Query: 241 gaatttactatacctgcacaatgtagaataaattctgcaaaggacaacaaaataaattta 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 389 gaatttactatacctgcacaatgtaaaataaattctgcaaaggacaacaaaataaattta 330
Query: 301 aaaattgggaataaatcaaggcacgtgttagattgtcaaatctgtgatatgtattaagat 360
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aaaattaggaataaaccaaggcacgtgttagattgtcaaatctgtgatatgtattaagat 270
Query: 361 gtataactaattttaactcctataattttaaacaatgtatggtg-tttttgaataaccca 419
|||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 269 gtataactgatcttaactcctataattttaaacaatgtatggtgttttttgaataaccca 210
Query: 420 gaaatagtcaaataattaataataatatcataatatattcgaggaagaattcattgtttt 479
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 209 gaaatagtcaaataattaataataatatcataatatattggaggaagaattcattgtttt 150
Query: 480 taagacaaggggcacgaaatatatggaggatattgtgcatcctgcaattgaaaacagttc 539
|||||||||| ||| ||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 149 taagacaaggagcatgaactatatggaggatattgtgcatcttgcaattgaaaacagttc 90
Query: 540 ttctatttgttttaccaatatcacagaaacactcttgctctcatccctctgattatttta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ttctatttgttttaccaatatcacagaaacactcttgctctcatccctctgattatttta 30
Query: 600 aaaagtatttgtgcaacatctacatgcca 628
|||||||||||||||||||||||||||||
Sbjct: 29 aaaagtatttgtgcaacatctacatgcca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1062
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1052
Effective search space: 684852
Effective search space used: 684852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
