Query= MSMg01no329_a08.b1 MSMg01no329_a08.b1 CHROMAT_FILE:
MSMg01no329_a08.b1 PHD_FILE: MSMg01no329_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:20 2005
(550 letters)
>mm_chr15_45102202_45103151
Length = 950
Score = 1035 bits (535), Expect = 0.0
Identities = 544/547 (99%)
Strand = Plus / Minus
Query: 4 ggaattctttgttgtcctatgcaaacatatacctacaaatacatatttgttttgcaagtt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ggaattctttgttgtcctatgcaaacatatacctacaaatacatatttgttttgcaagtt 658
Query: 64 atgttgctgggaacatgtccatctctaaaagacattattttgatggacttggcacttaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 atgttgctgggaacatgtccatctctaaaagacattattttgatggacttggcacttaga 598
Query: 124 taccacccctgggtaggcaaattgacctgtgagtggtttaaagaactgtgggggttcagg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 597 taccacccctgggtaggcaaattgacctgtgagtggtttaaagaactgtgggggttcggg 538
Query: 184 gtggggggcatgccagaccttattgaagcattagcctatgtcctttctgtgtgagaatag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gtggggggcatgccagaccttattgaagcattagcctatgtcctttctgtgtgagaatag 478
Query: 244 agaggagttttcctgtttctcagattgcatggttgattctttgccggttggaatttctgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 agaggagttttcctgtttctcagattgcatggttgattctttgccggttggaatttctgt 418
Query: 304 aacaatatggaatcatcatttttgtttcagctaaagaaatgagacacctgttctgacaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aacaatatggaatcatcatttttgtttcagctaaagaaatgagacacctgttctgacaat 358
Query: 364 tagtgaacactatgactaaaatctccaaccatatgttggatatctgagcccaaagtttgt 423
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tagtgaatattatgactaaaatctccaaccatatgttggatatctgagcccaaagtttgt 298
Query: 424 tcaccttgtattacccatatttagagataaatgatggtatagaatctaggggtggagaac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tcaccttgtattacccatatttagagataaatgatggtatagaatctaggggtggagaac 238
Query: 484 agaattgcaagagaataagagctgcatctgtttgtttatttaaaaattttatttattatt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 agaattgcaagagaataagagctgcatctgtttgtttatttaaaaattttatttattatt 178
Query: 544 tatatgt 550
|||||||
Sbjct: 177 tatatgt 171
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_a08.g1 MSMg01no329_a08.g1 CHROMAT_FILE:
MSMg01no329_a08.g1 PHD_FILE: MSMg01no329_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:20 2005
(658 letters)
>mm_chr15_45060746_45061804
Length = 1059
Score = 1237 bits (640), Expect = 0.0
Identities = 655/660 (99%), Gaps = 3/660 (0%)
Strand = Plus / Plus
Query: 1 ttaatatgtttctgggaccatcctaatttcttgtcatccatgcatattcaggtactctgt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 ttaatatgtttctgggaccatcctaatttcttgtcatcaatgcatattcaggtactctgt 260
Query: 61 ataacaaacctattatatacataaataaaccaattcacataaataaccccctatagccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataacaaacctattatatacataaataaaccaattcacataaataaccccctatagccat 320
Query: 121 aaacaccatgttattaatcttaagtcccgatcctgattatttgacctcagacttcattct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacaccatgttattaatcttaagtcccgatcctgattatttgacctcagacttcattct 380
Query: 181 caatatgacaatgaagagggtccaggtatcattttagaacttgtgtgtgatttttaatta 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 caatatgacaatgaagagggtccaggtatcattttagaacttgtgtgtgatttttactta 440
Query: 241 aaattacagatcctaatttgtacaactgaaaatttttcttccaatagtctttggttgagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaattacagatcctaatttgtacaactgaaaatttttcttccaatagtctttggttgagg 500
Query: 301 ccaaatattagaatttaaataatttgttccatgttcaaaacacagcagtagactgcagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccaaatattagaatttaaataatttgttccatgttcaaaacacagcagtagactgcagtg 560
Query: 361 ctcctgtgaagggcaacactttatattgtagtaagtcatatgtggtgctttgttttctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcctgtgaagggcaacactttatattgtagtaagtcatatgtggtgctttgttttctct 620
Query: 421 agtttttcagctttaacttgtttttcaattttctttttatt-atgtggctctcaaaagac 479
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 621 agtttttcagctttaacttgtttttcaattttctttt-atttatgtggctctcaaaagac 679
Query: 480 ctggagctaaaaatcctaagaaaaagagtctaaaagtaattgt-aaaaacaagctagaag 538
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 680 ctggagctaaaaatcctaagaaaaagagtctaaaagtaattgtgaaaaacaagctagaag 739
Query: 539 atataaatcttaataggagtttgattaaagtacatttgtgcagaactattctactaatag 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atataaatcttaataggagtttgattaaagtacatttgtgcagaactattctactaatag 799
Query: 599 catttactaaaacaaaacaaacaaacaaacaaaatcctaaaacagtggtggataatagag 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 catttactaaaacaaaacaaacaaacaaacaaaatcctaaaacagtggtggataatagag 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1059
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1049
Effective search space: 679752
Effective search space used: 679752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
