Query= MSMg01no335_c22.b1 MSMg01no335_c22.b1 CHROMAT_FILE:
MSMg01no335_c22.b1 PHD_FILE: MSMg01no335_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:51 2005
(555 letters)
>mm_chr15_50797888_50798841
Length = 954
Score = 1013 bits (524), Expect = 0.0
Identities = 545/552 (98%), Gaps = 3/552 (0%)
Strand = Plus / Minus
Query: 5 gaattctacacacatctgcga-aattcattctcccgtggggctctaaaggagattttatt 63
|||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||
Sbjct: 754 gaattctacacacatctg-gacaattcattctcccgtgggactctaaaggagattttatt 696
Query: 64 atctccattcaacagaagaagtgcctgagatgctgaagtgaaaactcttctcctgtgatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 atctccattcaacagaagaagtgcctgagatgctgaagtgaaaactcttctcctgtgatt 636
Query: 124 gggagaggaagaaagagggagaagcagcactgggatcccaaactccttgtcttcaaggct 183
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 635 gggagaggaagaaagagggagaagcagcactaggatcccaaactccttgtcttcaaggct 576
Query: 184 ctcttagattccaaagcttaagcgcagactgaggagtagtggataacactatcacatttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ctcttagattccaaagcttaagcgcagactgaggagtagtggataacactatcacatttc 516
Query: 244 ttattacaatttctcagatctttctaatcggaacccactaatccaaactcttaaagttca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ttattacaatttctcagatctttctaatcggaacccactaatccaaactcttaaagttca 456
Query: 304 cagtgacaaagagtgacaaaatactcccagttctcatgtgatatcttagattatccagac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cagtgacaaagagtgacaaaatactcccagttctcatgtgatatcttagattatccagac 396
Query: 364 ttattttaatctctgaaatttgattacatgattctgagctatgaaaaaagaagaaaaaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 395 ttattttaatctctgaaatttgattacatgattctgagctatgaaaaaagaag-aaaaaa 337
Query: 424 accacaatgttggaataattgatccaaacaatgacaggaagtattgctagagtcctcagc 483
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 336 accacaatgttggaataattgatccaaacaatgacaggaagtgttgctagagtcctcagc 277
Query: 484 tttggtcttaggttggggcaaggtgtagcctacacagttaattagcattatctacatttg 543
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 276 tttggtcttaggttggggcaaggtgtagcctacacagttaattagcgttatctacatttg 217
Query: 544 aatctggcactg 555
||||||||||||
Sbjct: 216 aatctggcactg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 954
Length adjustment: 10
Effective length of query: 545
Effective length of database: 944
Effective search space: 514480
Effective search space used: 514480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_c22.g1 MSMg01no335_c22.g1 CHROMAT_FILE:
MSMg01no335_c22.g1 PHD_FILE: MSMg01no335_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:51 2005
(503 letters)
>mm_chr15_50625916_50626818
Length = 903
Score = 934 bits (483), Expect = 0.0
Identities = 495/499 (99%)
Strand = Plus / Plus
Query: 1 ataaagtgtcagtctgtcagtctaaaggatatataaaaggaactaagtagaagtgagttc 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 ataaagtgtcagtctgtcagtctaaaggatatgtaaaaggaactaagtagaagtgagttc 260
Query: 61 attctaatttcttcctgtgttgtataacaaatatttcatgtttattagccttgaaagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attctaatttcttcctgtgttgtataacaaatatttcatgtttattagccttgaaagctt 320
Query: 121 aggtagaaaaaaaaatgttttacctacttaagaacaaaaatatttctgtttggatcactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggtagaaaaaaaaatgttttacctacttaagaacaaaaatatttctgtttggatcactt 380
Query: 181 ttaaatagccataaccaatatttaggataagtcttttctctaattagactttgttatgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaaatagccataaccaatatttaggataagtcttttctctaattagactttgttatgcg 440
Query: 241 tttaataagtaatctagtaactctaggctcaatgtatttgagggcattataattactcca 300
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttaataagtaagcgagtaactctaggctcaatgtatttgagggcattataattactcca 500
Query: 301 ttatagagtttatacatgaaataaacattgaacgaaatttccaaacattttaaaactcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttatagagtttatacatgaaataaacattgaacgaaatttccaaacattttaaaactcat 560
Query: 361 ataaaatatttttataacattttaaactccctatctctatattcttagtaagaaacagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataaaatatttttataacattttaaactccctatctctatattcttagtaagaaacagaa 620
Query: 421 ttgttatattgttgcttgtaaaagcaggccatgaatgggtaaactgtcttttaatctttt 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcttatattgttgcttgtaaaagcaggccatgaatgggtaaactgtcttttaatctttt 680
Query: 481 atatagttgctttgggtag 499
|||||||||||||||||||
Sbjct: 681 atatagttgctttgggtag 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
