Query= MSMg01no336_g10.b1 MSMg01no336_g10.b1 CHROMAT_FILE:
MSMg01no336_g10.b1 PHD_FILE: MSMg01no336_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:27 2005
(513 letters)
>mm_chr15_68791936_68792849
Length = 914
Score = 903 bits (467), Expect = 0.0
Identities = 500/511 (97%), Gaps = 1/511 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttgattgtccataggacactttctttggggacggtagtcacatttttagtcat 63
||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 204 ggaattcttgacagtccataggacactttctttggggatggtagtcacatttttagtcat 263
Query: 64 cactaaggaatgcctcagaagaggcctccagagctgttctaaccctgcacccagacctgc 123
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 264 cactaaggaatgcctcagaagaggcctccagagctgttctaaccctgcatccagacctgc 323
Query: 124 tcagatcacagctcttggaccaaaagcctgtcagcacctcacagcttcctgtctccccc- 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcagatcacagctcttggaccaaaagcctgtcagcacctcacagcttcctgtctcccccc 383
Query: 183 tttaacctgaagtgaactgtaagaagcccatctgatgcggtgtttgtagcctggcgtacc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttaacctgaagtgaactgtaagaagcccatctgatgcggtgtttgtagcctggcgtacc 443
Query: 243 tgacgtcacagcactgcttacccttcactacaattgtctctcaatgtctgacttcctact 302
|||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 444 tgacgtcacaacactgcttacccttcagtacaattgtctctcagtgtctgacttcctact 503
Query: 303 taagttatgtggtacaaaacaggtcttgtctctggaaggactctgcagacctttagcccc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taagttatgtggtacaaaacaggtcttgtctctggaaggactctgcagacctttagcccc 563
Query: 363 agcattgccaggcatgtagtaataggcacgtaaaagtgacagcccctgatggccaacgct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agcattgccaggcatgtagtaataggcacgtaaaagtgacagcccctgatggccaacgct 623
Query: 423 tagttgccttatagttttcatataactgagtgcacatagggtactcatgcagtcagtgca 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tagttgccttatagttttcatataactgagtgcacatagggtactcatgcagtcagtgca 683
Query: 483 tgtgtgtgtgaatgtgtgagtgtgtgtgtgt 513
||||||||||| |||||| ||||||| ||||
Sbjct: 684 tgtgtgtgtgagtgtgtgtgtgtgtgagtgt 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 914
Length adjustment: 10
Effective length of query: 503
Effective length of database: 904
Effective search space: 454712
Effective search space used: 454712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_g10.g1 MSMg01no336_g10.g1 CHROMAT_FILE:
MSMg01no336_g10.g1 PHD_FILE: MSMg01no336_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:27 2005
(511 letters)
>mm_chr15_68980563_68981473
Length = 911
Score = 919 bits (475), Expect = 0.0
Identities = 502/511 (98%)
Strand = Plus / Minus
Query: 1 agcatagtgggttcagctgtgtatcctgaaagaaatatgtttggtaccagtgattaacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agcatagtgggttcagctgtgtatcctgaaagaaatatgtttggtaccagtgattaacga 501
Query: 61 cttattaatcttgtgtgacttttaacatgagggggttaacctaaatctgatgactagtgt 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 500 cttattaatcttgtgtgacttttaacatgaggggggtaacctaaatctgatgactagtgt 441
Query: 121 ctttattaaacgaagagacagagacacatcagagaaggtcatgagaaggcaccagcagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctttattaaacgaagagacagagacacatcagagaaggtcatgagaaggcaccagcagag 381
Query: 181 cctgaggcaaagcacctccatgactgtatgcaaaacttggagaaaaaaacctttccatct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cctgaggcaaagcacctccatgactgtatgcaaaacttggagaaaaaaacctttccatca 321
Query: 241 ttttattttagttgtctagacacactaattactgactctgcgcctattaccatgtaaatt 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 320 atacattttagttgtctagacacactaattactgactctgcgcctattaccatgtgaatt 261
Query: 301 aatcttctttccccaggacttaaacctgataacactataccatctatatccttcatttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aatcttctttccccaggacttaaacctgataacactataccatctatatccttcatttga 201
Query: 361 gggttggagatatggctcagctggccatggtgctagctgccaagctgtccacctgagttc 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 200 gggttggagatatggctcagctggccatggtgctagctgccaagctatccacctgagttc 141
Query: 421 caatctcagagggaggagagaatccacacttctcacctccatgtgtgtttatggtgcagg 480
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 140 caatctcggagggaggagagaatccacacttctcacctccatgtgtgtttatggtgcacg 81
Query: 481 tgtgcgcacgcgtgtgcacacacacatacac 511
|||||||||||||||||||||||||||||||
Sbjct: 80 tgtgcgcacgcgtgtgcacacacacatacac 50
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
