Query= MSMg01no338_p10.b1 MSMg01no338_p10.b1 CHROMAT_FILE:
MSMg01no338_p10.b1 PHD_FILE: MSMg01no338_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:42 2005
(660 letters)
>mm_chr15_35256394_35257455
Length = 1062
Score = 1230 bits (636), Expect = 0.0
Identities = 655/662 (98%), Gaps = 2/662 (0%)
Strand = Plus / Plus
Query: 1 gaaagggcgacagagtcctggatcctgtagaagaaagcttgctgctgctcttagcagcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaagggcgacagagtcctggatcctgtagaagaaagcttgctgctgctcttagcagcga 260
Query: 61 gatcccactttggggtaccttcgagtgtttggtgtctttacatctcctccttcccctccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatcccactttggggtaccttcgagtgtttggtgtctttacatctcctccttcccctccc 320
Query: 121 aggttggaatgtcagttcaaaattgaaaagtaaaagtgaaaatttcaggtttgcggacct 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agattggaatgtcagttcaaaattgaaaagtaaaagtgaaaatttcaggtttgcggacct 380
Query: 181 cgcattttaaaaggaagtggaaaggctggactctcagttcttggctactaataaaggtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgcattttaaaaggaagtggaaaggctggactctcagttcttggctactaataaaggtaa 440
Query: 241 tagacttcattattaatccttcaggctctggaacaaaatgtctattaagatttggcataa 300
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagacttcattaaaaatccttcaggctctggaacaaaatgtctattaagatttggcataa 500
Query: 301 tttgttgaaataaggatttttacaatacatttttt--gtttactgctgagagatcacatg 358
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 tttgttgaaataaggatttttacaatacattttttttgtttactgctgagagatcacatg 560
Query: 359 tcagtaacctaggaaccaggcaaagtcaatccaatttataaataaaatttcaaaacattt 418
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 561 tcagtaacctaggaaccaggcaaagtcaatccaatttataaataaactttcaaaacattt 620
Query: 419 ataacaatactgtttataataatagcctttatcagactatcaaaattatatgattggggt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataacaatactgtttataataatagcctttatcagactatcaaaattatatgattggggt 680
Query: 479 ttcgttgaatcatttgctaatctactgttagggaaataatgcaaagatgaaatgaattat 538
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 681 ttcgttgaatcatttgctaatctactgttagagaaataatgcaaagatgaaatgaattat 740
Query: 539 ttaatttattgccatgcttaaatgcagggccaaattctaatggagactagtgtgtaaact 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttaatttattgccatgcttaaatgcagggccaaattctaatggagactagtgtgtaaact 800
Query: 599 ctgatcagagattagaagaaatctccaaatctgatgtcttgtggccagtatagagccccc 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctgatcagagattagaagaaatctccaaatctgatgtcttgtggccagtatagagccccc 860
Query: 659 ag 660
||
Sbjct: 861 ag 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1062
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1052
Effective search space: 683800
Effective search space used: 683800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_p10.g1 MSMg01no338_p10.g1 CHROMAT_FILE:
MSMg01no338_p10.g1 PHD_FILE: MSMg01no338_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:42 2005
(547 letters)
>mm_chr15_35443209_35444159
Length = 951
Score = 1046 bits (541), Expect = 0.0
Identities = 547/551 (99%), Gaps = 4/551 (0%)
Strand = Plus / Minus
Query: 1 aacacagagccaatttgtgctagccacaaaagaggatacacatcattaatggttataata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 aacacagagccaatttgtgctagccacaaaagaggatacacatcattaatggttataata 692
Query: 61 aatcaagactgtatttatttacctaatggtgtagcaataattttcattatattactatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 aatcaagactgtatttatttacctaatggtgtagcaataattttcattatattactatcc 632
Query: 121 tcaattctctcatgccccta----caaagttttaatagcagcttttattctgaaagacct 176
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 631 tcaattctctcatgcccctacattcaaagttttaatagcagcttttattctgaaagacct 572
Query: 177 aagttgtaagaacattcataccacttcataactttgacacaaagtacatagaagcagatt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aagttgtaagaacattcataccacttcataactttgacacaaagtacatagaagcagatt 512
Query: 237 agacttcatttggtataaaatcagttggcacttttacatctgtgcatgcaacataaatac 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 agacttcatttggtataaaatcagttggcacttttacatctgtgcatgcaacataaatac 452
Query: 297 accagctggcatctcaagcacacacacatatggacttcaaaacagaaacttccttatttg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 accagctggcatctcaagcacacacacatatggacttcaaaacagaaacttccttatttg 392
Query: 357 caacactgccagggtaattttgtatcctctgcacactgcagctatttgtcagggccctgc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 caacactgccagggtaattttgtatcctctgcacactgcagctatttgtcagggccctgc 332
Query: 417 aggtgtgcaatgcacataaacacacagctgtggtccagcaagccaagtgttccatcaaac 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aggtgtgcaatgcacataaacacacagctgtggtccagcaagccaagtgttccatcaaac 272
Query: 477 acataaagggagatctcagcagttgaattagtcatccttagaacaggtccagggagaaca 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 acataaagggagatctcagcagttgaattagtcatccttagaacaggtccagggagaaca 212
Query: 537 atatgggttag 547
|||||||||||
Sbjct: 211 atatgggttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 951
Length adjustment: 10
Effective length of query: 537
Effective length of database: 941
Effective search space: 505317
Effective search space used: 505317
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
