Query= MSMg01no339_f02.b1 MSMg01no339_f02.b1 CHROMAT_FILE:
MSMg01no339_f02.b1 PHD_FILE: MSMg01no339_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:07 2005
(339 letters)
>mm_chr15_29133853_29134591
Length = 739
Score = 617 bits (319), Expect = 0.0
Identities = 331/335 (98%)
Strand = Plus / Plus
Query: 5 gaattctctgagactctgaactaaaatagatattttcttctttccttatgtaatgtgtat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgagactctgaactaaaatagatattttcttctttccttatgtaatgtgtat 264
Query: 65 atttgtgtggtacttcaacaccacaatgagttgaagcttcaccaacatttcagtcaagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atttgtgtggtacttcaacaccacaatgagttgaagcttcaccaacatttcagtcaagaa 324
Query: 125 acttagaacatgagggtaaaaggagaatatgattcaagaaggaggttataaacgttatct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acttagaacatgagggtaaaaggagaatatgattcaagaaggaggttataaacgttatct 384
Query: 185 ctaagtaggtctatgagtcaggcaaagtacacgtttacagattcacacacaggaaggggc 244
|||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 385 ctaagtagttctatgagtcaggcaaagtgcacgtttacagattcacacacaggaaggggc 444
Query: 245 caggggagggattgaaggagatagagaaagagaagaatgatctatgcatatgttctacaa 304
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 445 caggggagggattgaaggagatagagaaagagaagaatggtctatgcatatgttctacaa 504
Query: 305 atttatgactgacaattcacaggttccataccatt 339
|||||||||||| ||||||||||||||||||||||
Sbjct: 505 atttatgactgaaaattcacaggttccataccatt 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_f02.g1 MSMg01no339_f02.g1 CHROMAT_FILE:
MSMg01no339_f02.g1 PHD_FILE: MSMg01no339_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:07 2005
(564 letters)
>mm_chr15_29164587_29165550
Length = 964
Score = 975 bits (504), Expect = 0.0
Identities = 537/548 (97%), Gaps = 1/548 (0%)
Strand = Plus / Minus
Query: 1 tataaactataaaggatgagaaggtatttcacagaaatgtttgaaaactccaagaaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tataaactataaaggatgagaaggtatttcacagaaatgtttgaaaactccaagaaaaga 488
Query: 61 atggaggaagggcagaatttccacagtgtcagctgataaaataaagaggagaaaatggat 120
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 487 atggaggaagggcagaatttccacagtgtcagatggtaaaataaagaggagaaaatggat 428
Query: 121 taaaatagtactgcatcatactgagaatcacatgagatgacacaatggtggtggacttgt 180
||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 427 taaaatagtgctgcatcatattgagaatcacatgagatgacacaatggtgctggacttgt 368
Query: 181 gttcttgacccaggaatgggttcattttaaagatatggttggaatatagtcaacatgctc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cttcttgacccaggaatgggttcattttaaagatatggttggaatatagtcaacatgctc 308
Query: 241 atcaataactttaatttgggtgatttttagaggattgttgtatgctctgtgtttgtgtaa 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 307 atcaataactttaatttgggtgatttgtagaggattgttgtatgctctgtgtttgtgtaa 248
Query: 301 tgtcagtgaactaatgaaaataatgaacagcaaaataagagggtatgaattttaaatttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgtcagtgaactaatgaaaataatgaacagcaaaataagagggtatgaattttaaatttt 188
Query: 361 atatattaatattaatatgtaaaaatatgtattggagatatagaatagcaatagcactct 420
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 187 atatattaatattaatatgt-aaaatatgtattggagacatagaatagcaatagcactct 129
Query: 421 ggagaacaggccacactgggcagtacagtagagcctgttctggtggaaagggtgctggtg 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggagaacaggccacactgggcagcacagtagagcctgttctggtggaaagggtgctggtg 69
Query: 481 agcaggtccaagggcttgagagcaggggacctggtcctgcattatgtgaggtagctaggg 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 68 agcaggtccaagggcttgagagcaggggacctggtcctgcattaggtgaggtagctaggg 9
Query: 541 acatgctg 548
||||||||
Sbjct: 8 acatgctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
