Query= MSMg01no342_f21.b1 MSMg01no342_f21.b1 CHROMAT_FILE:
MSMg01no342_f21.b1 PHD_FILE: MSMg01no342_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:52 2005
(461 letters)
>mm_chr15_61256301_61257161
Length = 861
Score = 731 bits (378), Expect = 0.0
Identities = 432/458 (94%), Gaps = 15/458 (3%)
Strand = Plus / Plus
Query: 4 ggaattctatgatgccagaagcagcccttgttcacagcataaaatagttcatcacaagtc 63
|||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 204 ggaattctatgaagggagaagcagcccttgttcacaggataaaatagttcatcacaagtc 263
Query: 64 taaaataattgcacaatctccaagttttatatttttgtggctcaagtctctttcacattt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taaaataattgcacaatctccaagttttatatttttgtggctcaagtctctttcacattt 323
Query: 124 catcatggaagtttgtagagaatatcctaagatcaagtggtactaacctataatcccaga 183
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cgtcatggaagtttgtagagaatatcctaagatcaagtggtactaacctataatcccaga 383
Query: 184 aatttagaagacagcaagagcaggaggattgtaaatttaaggccagcctaagttacagag 243
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aatttagaacacagcaagagcaggaggattgtaaatttaaggccagcctaagttacagag 443
Query: 244 tgcgacactgtctcaagaaacaaacaaactttcttacaaacaaaaaccataaaaaataaa 303
||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 444 tgcgacactgtctcaagaaacaaacaaac------------aaaaaccataaaaaataaa 491
Query: 304 aaccagaaggaatatttgtgtttgtgattagtgtcttaataaagagttgttctcaaactt 363
|||||||||| ||||| ||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 492 aaccagaagggatatt-gtgtttgtggttagtgtcttaataaagagttgttcttaaactt 550
Query: 364 gaagaagcataaatatcaatgaaagttgctacaataaagattttttttttgagctcatct 423
|||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||
Sbjct: 551 gaagaagcataaatatcaatgaaagttgctacaatacagatttttttt--gaactcatct 608
Query: 424 cagaaactgacagaatatcttggatacaatctaaaaat 461
||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cagaaactgacagaatatcttggatacaatctaaaaat 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_f21.g1 MSMg01no342_f21.g1 CHROMAT_FILE:
MSMg01no342_f21.g1 PHD_FILE: MSMg01no342_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:52 2005
(440 letters)
>mm_chr15_61417895_61418734
Length = 840
Score = 543 bits (281), Expect = e-159
Identities = 358/405 (88%), Gaps = 34/405 (8%)
Strand = Plus / Minus
Query: 68 catatgagacatcctacttgaaaaagtttactaatctgttaagatcatttgcatttcaag 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 catatgagacatcctacttgaaaaagtttactaatctgttaagatcatttgcatttcaag 781
Query: 128 taaaagaagttgtttcatctatttagcttacaaaaacatatttatttataattatatata 187
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 780 taaaagaagttgtttcatctatttagcttacaaagacatatttatttataattatatata 721
Query: 188 gataaagaagaacctgatggtgaaatggcagat--------------------------- 220
||||||||||||| ||| |||||||||||| ||
Sbjct: 720 gataaagaagaacatgagggtgaaatggcaaatacacacacacacacacacacacacaca 661
Query: 221 -----atatatatatatatatgtgttgcagattccaaacacaaatatataaaactaaaac 275
| | | | | | ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cacacacacacacacacata--tgttgcagattccaaacacaaatatataaaactaaaac 603
Query: 276 taatattgactataggtagagaattactcagaaactcaaataatatttctgtggttcaat 335
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 taatattgaatacaggtagagaattactcagaaactcaaataatatttctgtggttcaat 543
Query: 336 atctctttctttaactttctttgagttagtatcattctcagacaaattttgcaatcctcg 395
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atctctttctttaactttctttgagttagtatcattctcagacaaattttgcaatcctca 483
Query: 396 tgttagaggggtgcttgctgagcagtcaaaatttatattctcttg 440
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tgttagaggggtgcttgctgagcagtcaaaatttatattctcttg 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
