NAAATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCATTGATCTGCCTTTCCATATTAGTAATAGGGTGACTCTTCC
AGAGGGTTGAGAATCCACTCCAAGGCATGGTCTCAAGCTTCCCTCAGCCT
CAATTAATCGTAGTCGTGGTTTTCCTAGGCAAGCATTATTCAAATTTGTC
TCATTTGTTGTTTTCTATGCTTCCGTGGTTCAACATCTCCTAGATAAGTG
CATTTGGCCTTCAGATATGTCAGTGCATTTAATCACTAAATACAGTGTTT
TGGAGCCTGAAGAGATGGCTCAGCAGTTAAGAGCACTCGCTGTTCCTGCA
AAGGACACAGGCTTGTTTCCCAGCATCCACTTGGTAGCTCATAGTCTTCT
GTCACTCCTGTCCCATGGGATCCAATGCCCTCTCCTGCCCTTCTTGCCCA
CCAGTCATGTAGGTGGTACACAATCTTATATACAAGTAAAACACATACAT
GGAATAAAAATATATAAACTCTTTAAGACTGTATGTTTTCACGTGGGTAC
TGTGGCTTCTCTTCATAGTGATTTCACTACTTTTGGTCTTATCTGCTGAA
CTGGCTCATTTTAAACCTTCTCCGTTCCCCGAATTTTGTGCAATTTGAAA
ACTCACTCTTGTGGGTTTTGTATTTTGGATTGCCTTTTTAAGATTATTAA
TTTTCCTTTTGACAGGGCAAAAAATAACTTTTTCCTTTTGGTTTTAAAGT
TTTTTTTTACCGCCTGTTN

GATTGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAGTCTGTCCTTGTTATGGTTATGAC
TGCTGTGATAAAAAGCACCATGACCAAGGTCAAGTTGAGAAGGAAGGGAT
TTGTGTGGCTTGTTCTTTCACACTGATGTCCGTCACTGCAGCGAGTCAGG
ATGGGAGCTCAAGAAGGGCTGGAACCTGGAAGCAGGAGCTGATGCAGAGG
CCATGAGAGGGTGCTGCTTTCTAGCTTGCTACCCATGGCTTATTCAGCCT
GCTCACTTAGAGAACCTTGGATCATCAGTCCAGAGGTGAGACCAGCTACA
ATAGACTTGGCCCTCACCCATCAATCACTAATTTTAAAAATGATACAGTC
AGTCTCTATACTGAGGTTGCCTCCTTTCAGATGACTGTTGTTTATATCAA
GTTGACACAAAACTAGCCAACACAACTGAAACTTTGTCAACTTGACGTAC
AAACATATCATTTTCAAGCCACGACTTTCCTGTCTTGTTTAATCCCCTAA
CATCACACATGAATACCAACATTTCAAAATTTNAAATTCCCAGTCTTTAA
AAATCTAANACACTTAATAAGTCAGCCCCCTTTAAAATCTACAGTATTTT
GAAAAAACCCACAATCTCTTTTAAAGTTCAAAGTCTCTCAAGTATGAGTT
CCGTGTAAATATAATAAAAAAAATCAGTTAAATGCTTCCTTACTTCCACT
GGGAGAAATCAAGTACTGTG

Query= MSMg01no347_f04.b1 MSMg01no347_f04.b1 CHROMAT_FILE:
MSMg01no347_f04.b1 PHD_FILE: MSMg01no347_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:15 2005
         (502 letters)



>mm_chr15_91493976_91494877
          Length = 902

 Score =  909 bits (470), Expect = 0.0
 Identities = 491/498 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattgatctgcctttccatattagtaatagggtgactcttccagagggttgagaa 64
           |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 205 gaattcattgatctacctttccatcttagtaatagggtgactcttccagagggttgaaaa 264

                                                                       
Query: 65  tccactccaaggcatggtctcaagcttccctcagcctcaattaatcgtagtcgtggtttt 124
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tccacgccaaggcatggtctcaagcttccctcagcctcaattaatcgtagtcgtggtttt 324

                                                                       
Query: 125 cctaggcaagcattattcaaatttgtctcatttgttgttttctatgcttccgtggttcaa 184
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 325 cctaggcaagcattattcaaatttgtctcatttgatgttttctatgcttccgtggttcaa 384

                                                                       
Query: 185 catctcctagataagtgcatttggccttcagatatgtcagtgcatttaatcactaaatac 244
           ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 385 catctcccagataagtgcatttggccttcaaatatgtcagtgcatttaatcactaaatac 444

                                                                       
Query: 245 agtgttttggagcctgaagagatggctcagcagttaagagcactcgctgttcctgcaaag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agtgttttggagcctgaagagatggctcagcagttaagagcactcgctgttcctgcaaag 504

                                                                       
Query: 305 gacacaggcttgtttcccagcatccacttggtagctcatagtcttctgtcactcctgtcc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gacacaggcttgtttcccagcatccacttggtagctcatagtcttctgtcactcctgtcc 564

                                                                       
Query: 365 catgggatccaatgccctctcctgcccttcttgcccaccagtcatgtaggtggtacacaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 catgggatccaatgccctctcctgcccttcttgcccaccagtcatgtaggtggtacacaa 624

                                                                       
Query: 425 tcttatatacaagtaaaacacatacatggaataaaaatatataaactctttaagactgta 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcttatatacaagtaaaacacatacatggaataaaaatatataaactctttaagactgta 684

                             
Query: 485 tgttttcacgtgggtact 502
           ||||||||||||||||||
Sbjct: 685 tgttttcacgtgggtact 702


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space:   438864
Effective search space used:   438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)