Query= MSMg01no348_h07.b1 MSMg01no348_h07.b1 CHROMAT_FILE:
MSMg01no348_h07.b1 PHD_FILE: MSMg01no348_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:45 2005
(485 letters)
>mm_chr15_6524255_6525139
Length = 885
Score = 909 bits (470), Expect = 0.0
Identities = 479/482 (99%)
Strand = Plus / Plus
Query: 4 ggaattctctgtctactatgctgtatgctagccaacctacccgcaggaaagcaggcaagc 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctgcctactatgctgtatgctagccaacctacccgcaggaaagcaggcaagc 263
Query: 64 acacacagcctcaggagagcgcacagctgccaggtgtattgttcaggggacattttttac 123
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 264 acacacagcctcaggagagcgcacagctgccaggtgtattattcaggggacattttttac 323
Query: 124 ctcagagtgtaagccataagggaaagggcattgctgcctggtgggatatcacaaaagtat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctcagagtgtaagccataagggaaagggcattgctgcctggtgggatatcacaaaagtat 383
Query: 184 ctcctctcatatgtcaaaaagagtgacagcattattaaagctgtcaatgaggcttctgtc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctcctctcatatgtcaaaaagagtgacagcattattaaagctgtcaatgaggcttctgtc 443
Query: 244 aataaatcttcccaccaatgccctgccctctgagacagtaggctcctgccctcggggact 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aataaatcttcccaccaatgccctgccctctgagacagtaggctcctgccctcggggact 503
Query: 304 taagtttgcggtgagagacaagttcccacatcctgttgagaaaggggcctcgactcactc 363
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taagtttgtggtgagagacaagttcccacatcctgttgagaaaggggcctcgactcactc 563
Query: 364 cagtctcagaggttcagctgattggaacccactacagcccttttgcaatggactagagat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cagtctcagaggttcagctgattggaacccactacagcccttttgcaatggactagagat 623
Query: 424 ctcagagttggattcatggctgaggtcaaccaaagaagtgaagaaatcatttgccaacta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctcagagttggattcatggctgaggtcaaccaaagaagtgaagaaatcatttgccaacta 683
Query: 484 ct 485
||
Sbjct: 684 ct 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_h07.g1 MSMg01no348_h07.g1 CHROMAT_FILE:
MSMg01no348_h07.g1 PHD_FILE: MSMg01no348_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:45 2005
(435 letters)
>mm_chr15_6718808_6719641
Length = 834
Score = 818 bits (423), Expect = 0.0
Identities = 432/435 (99%), Gaps = 1/435 (0%)
Strand = Plus / Minus
Query: 1 tctaatcaccagaaagaaaagcaactgttcatatttctatttagtaagctgtttgcatca 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 634 tctaatcaccagaaagaaaagcaactgttcatatttctatttagtaag-tgtttgcatca 576
Query: 61 agtcccatggaaatgtaagcggcagaccctggtgcccttcagaacctacctacactgagc 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 575 agtcccatggaaatgtaagcggcagaccccggtgcccttcagaacctacctacactgagc 516
Query: 121 agggcttctatgaactcatccgtcacaacgggcagagggagacgaaagatgtcatagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 agggcttctatgaactcatccgtcacaacgggcagagggagacgaaagatgtcatagagc 456
Query: 181 acttcgagcagacctcgctggaacaacaagtacactccacttatttctacagaaaaagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 acttcgagcagacctcgctggaacaacaagtacactccacttatttctacagaaaaagtc 396
Query: 241 cttaatggcttttaaaagatcatgtttacagaataacaaagtaacagaaacatataccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cttaatggcttttaaaagatcatgtttacagaataacaaagtaacagaaacatataccta 336
Query: 301 agggatgattactaaatatttaacatatatgtcttttaattttttaatctttccttatca 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 agggataattactaaatatttaacatatatgtcttttaattttttaatctttccttatca 276
Query: 361 ccactgtacaaatctggaaagagatttcagttctttccatataggcacagaggccagctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ccactgtacaaatctggaaagagatttcagttctttccatataggcacagaggccagctg 216
Query: 421 gtggtcagacgggtg 435
|||||||||||||||
Sbjct: 215 gtggtcagacgggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 834
Length adjustment: 9
Effective length of query: 426
Effective length of database: 825
Effective search space: 351450
Effective search space used: 351450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
