XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
ACTTAGGATTCATCCTGTCTCAAGCCTGAGAATCAATCTGCCCCCACTTT
AACCGGGACAATCAAGGCCCAGGATATGAGCAGGGGGTCCTCTTCTATAA
CCACCATTTCCTGGGAACTCTGAACTGTGCCATGAGCATGGAGAAAGCAT
ATCCAAGTCTAGCAGAAGAGAGCAAGGTGTGGCTCTGTAGGCAAGGTGTA
CTGGCTGGTTTTGTGTGTCAACATGGCACAAGCTAGAGTAGTTATCACAG
AGAAAGGAGCCTCCCTTGAGGAAACGCTCCCATGAGATCCAGCTGTAAGG
CATTTCTCAGTTAGTGATCAAGGGTGGGAGGGCCCATTGTGGGTGGTGCC
ATCCATCTCTGGGCTGGTAGTCCTGAGTTCTATAAGAAAGCAAGCTGAGC
AAGCCAAGGGAAGCAAGCCAGTAAGTAACATCCCTCCATGGCCTCTGCAT
CAGCTCCTGCCTCCAGGTTCCTGCCCCGTGCGAGTTCCTGTCCTTACTTC
CTTTGGTGATGAACAGCAATGTAGAAGTGTAAGCTGAATAAACCCTTTCC
TCCCCAACTTGCTTCTTGGTCACGATGCTTGTGCAGGAATAGAAACCCTG
ACTAATACTGCATGTCTGAGGAACCCCTCATGAAGAGTATATATTAAGTA
GAACCCGAATAGAAAAGCCCCGAACCTGGGAGCCCCG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAGAAGTTAGACTCCAAAAGACCA
AACAACCCACTAAAAAAAATTGGGTACTGAACTAAACAGAGAATTCATAA
CAAAGGAATCTTGAATGGCTGAGAATAAATGTTTAACATCCTTAGTCATC
AGGAAGATGCATATCAAAATGACCCTGAGATTTCCACCTTACACCAATCA
GAATAGTTAAGATAAAAAAACAAAACAAAACAAAAAACTCAAGTGACAGC
ACATGCTGATAAGGATGTGTTGAAAGGGGAATATTTCTCCACTGATGGTG
GGATTGCAAACTTGTAAAACCACTCTGGAAATCAACCTGGCGATTTCTCA
GAAAATTGGAAATAGTTCTGCCTGAAGACCCATCTATACCACTCCTGGGC
ATATACCCAAAAGATGCTCTACCCTACTCCAAGGACACGTACTCAACTAT
GTTCATAGCAGTCTTATTTATAATAGCCAGAAACTGGAAGCAACCCAGAT
GTCCATCAACTGAAAAATGGGTACAGAAAAATGTGGTTCACTTACACAAT
GAAATACTATTCAGCTATTAAAAACAAAGACATCATGAATTTTGCGGGCA
AATGGATGGAACTAGAAAATATCCTGAGTAAGGNCACATTTCTTAATAGT
GCCCACCCCCTATGAGCCTATGGGGGCTATTTTCCATTCAACTGCCACTT
TTTAC

Query= MSMg01no349_h01.b1 MSMg01no349_h01.b1 CHROMAT_FILE:
MSMg01no349_h01.b1 PHD_FILE: MSMg01no349_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:03 2005
         (575 letters)



>mm_chr15_88314741_88315715
          Length = 975

 Score =  975 bits (504), Expect = 0.0
 Identities = 552/568 (97%), Gaps = 5/568 (0%)
 Strand = Plus / Plus

                                                                       
Query: 10  cacttaggattcatcctgtctcaagcctgagaatcaatctgcccccactttaaccgggac 69
           ||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 210 cacttgggattcatcctgtctcaaacctgagaatcaatctgcccccactttaatcgggac 269

                                                                       
Query: 70  aatcaaggcccaggatatgagcagggggtcctcttctataaccaccatttcctgggaact 129
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aatcaaggcccaggatatgagcagggggtcctcttctataaccaccatttcctgggaact 329

                                                                       
Query: 130 ctgaactgtgccatgagcatggagaaagcatatccaagtctagcagaagagagcaaggtg 189
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 330 ctgaactgtgccatgagcatggagaaagcatatccaagtctaacagaagagagcaaggtg 389

                                                                       
Query: 190 tggctctgtaggcaaggtgtactggctggttttgtgtgtcaacatggcacaagctagagt 249
           ||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tggttctgtaggc-aggtg-actggctggttttgtgtgtcaacatggcacaagctagagt 447

                                                                       
Query: 250 agttatcacagagaaaggagcctcccttgaggaaacg-ctcccatgagatccagctgtaa 308
           ||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||
Sbjct: 448 agttatcacagagaaaggagcctcccttgaggaaatgcct-ccatgagatccagctgtaa 506

                                                                       
Query: 309 ggca-tttctcagttagtgatcaagggtgggagggcccattgtgggtggtgccatccatc 367
           |||| ||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 507 ggcattttctcaattagtgatcaagggtgggagggccctttgtggatggtgccatccatc 566

                                                                       
Query: 368 tctgggctggtagtcctgagttctataagaaagcaagctgagcaagccaagggaagcaag 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tctgggctggtagtcctgagttctataagaaagcaagctgagcaagccaagggaagcaag 626

                                                                       
Query: 428 ccagtaagtaacatccctccatggcctctgcatcagctcctgcctccaggttcctgcccc 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ccagtaagtaacatccctccatggcctctgcatcagctcctgcctccaggttcctgcccc 686

                                                                       
Query: 488 gtgcgagttcctgtccttacttcctttggtgatgaacagcaatgtagaagtgtaagctga 547
           ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 687 gtgcgagttcctgtcctgacttcctttggtgatgaacagcaatgttgaagtgtaagctga 746

                                       
Query: 548 ataaaccctttcctccccaacttgcttc 575
           ||||||||||||||||||||||||||||
Sbjct: 747 ataaaccctttcctccccaacttgcttc 774


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space:   545225
Effective search space used:   545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)