NNNNNNNTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTTCTTTAGCTCTGTACCCCACTTTTTAAAATAGGGTC
ATTTGGTTCTCTGGAGTCAAACTTCCTGAGTTCTTTTTATATATTAGATA
TTAGCCCTCTATCAGATTCAGGGTTGGTAAAGATCTTTTTCTAATCTGTA
GGTTGCTGTTTTGTCCTATTGACAATATCCTTTGCCTTACAGAAGATTTT
TCAATTTAATGAAATCTCATTTTTCTATAGATGATCTTAGAACCTGAGCC
ATTCTTCACAGAGATAGAAAGAGGAATTTTCTAATTCATCTGAAATAATA
AAAAACCCAGAATAGCAAAAACTATTCTCTACAATAACAGAGCTAATACG
AATTATTAAACCTGACCTCAATCCCTATTGAAGAGTAATGGTCATAAAAA
CTACATGGTTTTGGTACAGAGAAAGGCAGGTAGAACAATGGAATTGAATT
GAAGACCCAGAATCAAACTCATATAGTTATGGTTAACTGATCTTTGACAA
AGAAGTCAAAACCATCCAGTGGAAAAATGACAGCAAATTCAACAAATGGT
TCTGGTTCAAGTAACAGTCAACATGTAGAAGAGCGCAAATTGACCCATTC
TTATTTCTTTGTACAAAGCTCAAATCCCAGTAAACAAACTTTTATGAGAA
GCCCAAGTGTAACACCATGTGTAGTTACTAGACACAA

NNNNNNNCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACGTGAACTAGTAGG
ACATATGTGAAAGCAAAATTATCTGGAAACAGAAGCAAAAACCATTACAT
GATGAGTTAAAGAAGAAATGTCCTCACTCCTATGAATCTGCGCCACTGAA
CTGGTGATTAAGCTCAGCCAGAGATGTATACTTCCTTCCAAGCATCTGGG
GAAAATAATGCGCAAGAGTATATCTGTGCCTATATGAGGATTCTGAAGCA
TTCAAAGAACATGCTCCTGCAAATTGTTGATTATGTAAAACTAATAGTGT
TGCATTATCTAATTGCACATGACAGGGAATGTGCTTAGTATGTACCTAAT
GTGATCATTGGAGGGGTGTACTTTTTAACAGTTATTCTGCTATAACAACC
ATATTCTGTAATTATACTCACACACACACACACACATGCACACATGCACC
AAACACATGTAGTGACTTCAAAATGTTAATTAATTTAATGATATATTATT
AATATTTTCTATATTTACAAATAAGTACATTCTACACATTTAACAATTTC
TCCACATTTTCTTATTACAGAAGTCCTAAATTTTCATTTTCTTTCTTCTT
TTGNTATTTATGTTTGCCTAAGGATGAAAAAGTTTTATGAAGAAAATGAA
CCTATTTTTGGAAATTGGTAATTATTATTACCGGTCCCACCCCTATTTTG
CTG

Query= MSMg01no351_e13.g1 MSMg01no351_e13.g1 CHROMAT_FILE:
MSMg01no351_e13.g1 PHD_FILE: MSMg01no351_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:29 2005
         (508 letters)



>mm_chr15_16988753_16989660
          Length = 908

 Score =  917 bits (474), Expect = 0.0
 Identities = 497/508 (97%), Gaps = 6/508 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aacgtgaactagtaggacatatgtgaaagcaaaattatctggaaacagaagcaaaaacca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aacgtgaactagtaggacatatgtgaaagcaaaattatctggaaacagaagcaaaaacca 525

                                                                       
Query: 61  ttacatgatgagttaaagaagaaatgtcctcactcctatgaatctgcgccactgaactgg 120
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 524 ttacatgatgagttaaagaagaaatgtcctcactcctatgtatctgcgccactgaactgg 465

                                                                       
Query: 121 tgattaagctcagccagagatgtatacttccttccaagcatctggggaaaataatgcgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tgattaagctcagccagagatgtatacttccttccaagcatctggggaaaataatgcgca 405

                                                                       
Query: 181 agagtatatctgtgcctatatgaggattctgaagcattcaaagaacatgctcctgcaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 agagtatatctgtgcctatatgaggattctgaagcattcaaagaacatgctcctgcaaat 345

                                                                       
Query: 241 tgttgattatgtaaaactaatagtgttgcattatctaattgcacatgacagggaatgtgc 300
           || ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 344 tgctgattatgtaaaactaatagttttgcattatctaattgcacatgacagggaacgtgc 285

                                                                       
Query: 301 ttagtatgtacctaatgtgatcattggaggggtgtactttttaacagttattctgctata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttagtatgtacctaatgtgatcattggaggggtgtactttttaacagttattctgctata 225

                                                                       
Query: 361 acaaccatattctgtaattatactcacacacacacacacacatgcacacatgcaccaaac 420
           ||||||||||||||||||||||||||||||||||||      ||||||||||||||||||
Sbjct: 224 acaaccatattctgtaattatactcacacacacaca------tgcacacatgcaccaaac 171

                                                                       
Query: 421 acatgtagtgacttcaaaatgttaattaatttaatgatatattattaatattttctatat 480
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 acaagtagtgacttcaaaatgttaattaatttaatgatatattattaatattttctatat 111

                                       
Query: 481 ttacaaataagtacattctacacattta 508
           ||||||||||||||||||||||||||||
Sbjct: 110 ttacaaataagtacattctacacattta 83


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space:   447204
Effective search space used:   447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)