Query= MSMg01no351_g04.b1 MSMg01no351_g04.b1 CHROMAT_FILE:
MSMg01no351_g04.b1 PHD_FILE: MSMg01no351_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:37 2005
(633 letters)
>mm_chr15_41382826_41383860
Length = 1035
Score = 1133 bits (586), Expect = 0.0
Identities = 620/632 (98%), Gaps = 3/632 (0%)
Strand = Plus / Plus
Query: 4 ggaattcagaaag-atcacccagcaatctgtatcctgtcaagtctccaggtgattttgat 62
||||||| ||||| | || ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 203 ggaattcggaaagaagcatccagcaatctgtatcctgtcaagcctccaggtgattttgat 262
Query: 63 ggatgttcaagtttgagaacagatggtacaaaatgatctctcttgagtcaggatttatag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggatgttcaagtttgagaacagatggtacaaaatgatctctcttgagtcaggatttatag 322
Query: 123 catgactgccaaaaataatgacttcgggcataattgatatgcaggagatccttgcaataa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 catgactgccaaaaataatgacttcgggcataattgatatgcaggagatccttgcaataa 382
Query: 183 tattaactaacagtttcagctgattttctaagattttgacaggaagagagtgctggtggc 242
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tattaactaacagtttcagccgattttctaagattttgacaggaagagagtgctggtggc 442
Query: 243 atagaagaccatctttttttctcctgttaattttggcacctaattgctgaaaacattgga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atagaagaccatctttttttctcctgttaattttggcacctaattgctgaaaacattgga 502
Query: 303 ccaacttttgcagtaaacttgtttttaaaatgagtgtaatttttttt--ggtatttaaag 360
| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 503 caaacttttgcagtaaacttgtttttaaaatgagtgtaattttttttttggtatttaaag 562
Query: 361 ctttaactaggaaatgtgtttcaggagaggatatttctgcccactcttgttctcatgtaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 563 ctttaactaggaaatgtgtttcaggagaggatatttctgcccactcttgttctcatataa 622
Query: 421 attttaaaataatatttttgttgagctgcaattcacaggccatgaatctcacgcatttaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 623 attttaaaataatatttttgttgagctgcaattcacaggccatgaatctcatgcatttaa 682
Query: 481 actatgagagtgtaagctttcagtatattcacattttttatccataaccaagagcaactg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 683 actatgagagtgtaagctttcagtatattcacattttttatccataaccaagatcaactg 742
Query: 541 cggactatttctgttatcgccaaaaggaattccctttatattagctgattctcttttttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cggactatttctgttatcgccaaaaggaattccctttatattagctgattctcttttttt 802
Query: 601 aaatcccctatcagatatttattatttacctg 632
||||||||||||||||||||||||||||||||
Sbjct: 803 aaatcccctatcagatatttattatttacctg 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1035
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1025
Effective search space: 638575
Effective search space used: 638575
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_g04.g1 MSMg01no351_g04.g1 CHROMAT_FILE:
MSMg01no351_g04.g1 PHD_FILE: MSMg01no351_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:37 2005
(547 letters)
>mm_chr15_41445424_41446372
Length = 949
Score = 980 bits (507), Expect = 0.0
Identities = 538/549 (97%), Gaps = 2/549 (0%)
Strand = Plus / Minus
Query: 1 tgtctttcttcaattctttttcttaaatgaacacattaagaacagtaataattgagaaat 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 749 tgtctttcttcaattctttttcttaaatgatcacattaagaacagtaataatttagaaat 690
Query: 61 tcatgcttttgtaacgttttataaaattaatttggttttctagaatgataatatttatag 120
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 689 tcatgcttttgtaacgttttataaaattaatttggttttataaaatgataatatttatag 630
Query: 121 aaaattttcatccatcaatagtcctgattttgcaaaggtatgagaaagaggtaatcgcca 180
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 629 aaaattttcatccatcaatagtcctgattttgcacaggtatgagaaagaggtaatcgcaa 570
Query: 181 catttatattctgcctccaaactcagcagtcatcattattaatgttgttcttgaaaccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 catttatattctgcctccaaactcagcagtcatcattattaatgttgttcttgaaaccag 510
Query: 241 ggctgtgtttagatgggaatgtcttagaatgacaggtattagcaaatgagaaatggatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggctgtgtttagatgggaatgtcttagaatgacaggtattagcaaatgagaaatggatct 450
Query: 301 --gtgtcgcactagaattcatggattgtttgttcttcaccaatatccccagacaaacggt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ctgtgtcgcactagaattcatggattgtttgttcttcaccaatatccccagacaaacggt 390
Query: 359 aagagaaaataatgtattagaagtgttgttttttgcttgtggaaactggccatggcagcc 418
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 389 aagagaaaataatgtattagaagtgttgtttcttgcttgtggaaactggccatggcagcc 330
Query: 419 tttgaaggcataggcaatttcagcaggataatgaaagtctgcagatatttccaggcatga 478
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 329 tttgaaggcataggcaatttcagcaggataatgaaagtctgcagatatttccgggcatga 270
Query: 479 aagagcttctccatggcttgggccattctcattgtcaaagcactgatggaatgaaatggt 538
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 269 aagagcttctccatggcttgggccattctcattgtcaaagcactgatgaaatgaaatggt 210
Query: 539 gttgaaagt 547
|||||||||
Sbjct: 209 gttgaaagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 949
Length adjustment: 10
Effective length of query: 537
Effective length of database: 939
Effective search space: 504243
Effective search space used: 504243
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
