Query= MSMg01no351_m24.b1 MSMg01no351_m24.b1 CHROMAT_FILE:
MSMg01no351_m24.b1 PHD_FILE: MSMg01no351_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:09 2005
(514 letters)
>mm_chr15_72521469_72522382
Length = 914
Score = 938 bits (485), Expect = 0.0
Identities = 499/505 (98%), Gaps = 4/505 (0%)
Strand = Plus / Minus
Query: 5 gaattctaatacaa--ttcgctcctgtcatcagtgtagttgatgccttgatcatcctaag 62
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gaattctaatacaaact--gctcctgtcatcagtgtagttgatgccttgatcatcctaag 650
Query: 63 tgaaatgcagggaatcatttggtatctgtctccagagagttcagctttcagagctgttgg 122
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tgaaatgcagggaatcatttgctatctgtctccagagagttcagctttcagagctgttgg 590
Query: 123 taataacttggttcaggggtctttcatcttgcccagtgcagtgcagaggcttggcagctg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 taataacttggttcaggggtctttcatcttgcccagtgcagtgcagaggcttggcagctg 530
Query: 183 cacattttgtcaaatcacttctgctgtctgacctgtgatgggcagaggaatgtggtggca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 cacattttgtcaaatcacttctgctgtctgacctgtgatgggcagaggaatgtggtggca 470
Query: 243 tgaacacagatcgattgctgcccaccgccaatcctaatatgtctatatgtgccttagaac 302
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 469 tgaacacagatcgattgctgcccaccgccaatcctaatacgtctatatgtgccttagaac 410
Query: 303 tgcttggaagggaatcaaggaaacacatggataaggtagaatttgtgtttgaccaaccag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tgcttggaagggaatcaaggaaacacatggataaggtagaatttgtgtttgaccaaccag 350
Query: 363 agtgtgtatgaaagcacattccatggatatcatggcaggcctctgtgtgtgcacatgagc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 agtgtgtatgaaagcacattccatggatatcatggcaggcctctgtgtgtgcacatgagc 290
Query: 423 gggcatgcactgtgtctgtgtgactgtgtgtgttgaacatgtacacagtctgtgagctct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gggcatgcactgtgtctgtgtgactgtgtgtgttgaacatgtacacagtctgtgagctct 230
Query: 483 tagcactcactagatgccagttttt 507
|||||||||||||||||||||||||
Sbjct: 229 tagcactcactagatgccagttttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_m24.g1 MSMg01no351_m24.g1 CHROMAT_FILE:
MSMg01no351_m24.g1 PHD_FILE: MSMg01no351_m24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:09 2005
(441 letters)
>mm_chr15_72378792_72379635
Length = 844
Score = 801 bits (414), Expect = 0.0
Identities = 436/444 (98%), Gaps = 3/444 (0%)
Strand = Plus / Plus
Query: 1 tcatttcccctctccagcagtagcctccccgcccccaccccccatccccacttcccccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatttcccctctccagcagtagcctccccgcccccaccccccatccccacttcccccag 260
Query: 61 tgcgcgcgcttcttcactgttcatttcttgattcctctgctgaggagcagagtgcaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcgcgcgcttcttcactgttcatttcttgattcctctgctgaggagcagagtgcaggaa 320
Query: 121 c-tcccccccccc--cgcgcgctcccccggcgaggcaccctccaggttaaggcttggaaa 177
| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcccccccccccgcgcgcgctcccccggcgaggcaccctccaggttaaggcttggaaa 380
Query: 178 tagaacaggaggatctggccagggagctactagcctttgagtttaaggaagaagccagga 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaacaggaggatctggccagggagctactagcctttgagtttaaggaagaagccagga 440
Query: 238 ttcctgtttaggtcttctgggttccccacccacccatcctctttaggttgcccagaggtt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcctgtttaggtcttctgggttccccacccacccatcctctttaggttgcccagaggtt 500
Query: 298 ttcttgctcacaaagctcccctagagcagggctgctgcggactgggacagacagaaccat 357
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 501 ttcttgctcacaaagctcccctagagcagtgctgctgcggactgggacagacagaatcac 560
Query: 358 gcttttgagaccctgggctttggtttcctcgaccaggctatcttctctgtccctagccat 417
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcttttgagaccccgggctttggtttcctcgaccaggctatcttctctgtccctagccat 620
Query: 418 ggacgctgatgaagaaatctggtg 441
||||||||||||||| ||||||||
Sbjct: 621 ggacgctgatgaagagatctggtg 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 844
Length adjustment: 9
Effective length of query: 432
Effective length of database: 835
Effective search space: 360720
Effective search space used: 360720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
