Query= MSMg01no351_o21.b1 MSMg01no351_o21.b1 CHROMAT_FILE:
MSMg01no351_o21.b1 PHD_FILE: MSMg01no351_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:17 2005
(568 letters)
>mm_chr15_47441831_47442797
Length = 967
Score = 1006 bits (520), Expect = 0.0
Identities = 553/564 (98%), Gaps = 1/564 (0%)
Strand = Plus / Minus
Query: 5 gaattccactgaggaattcaagtagatataaccatttctttgtgaaagttggccaaaact 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 gaattccactgaggaatttaagtagatataaccatttctttgtgaaagttggccaaaact 708
Query: 65 tagtcatatttgcttcatgagtttatattcttctgttgtcatacatcaaaaacaatggca 124
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 707 tagtcatatttgcttcatgagtttatatacttctgttgtcatacatcaaaaacaatggca 648
Query: 125 aactcatattttcattcatgaacacatgaatgcagctatcctgtaagaaaggggttatgg 184
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aactcatattttcattcaagaacacatgaatgcagctatcctgtaagaaaggggttatgg 588
Query: 185 gtagagaaactgaaaatgtatttcgagaaaacattcaaattgaactggccagtaagacaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gtagagaaactgaaaatgtatttcgagaaaacattcaaattgaactggccagtaagacaa 528
Query: 245 gtaggaagctggtagcaatgagcactaggaaagccttaagcaggacacagagagtaagga 304
|||| |||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 527 gtagaaagctggtagcagtgagcactaggaaagccttaagcaggacacatagagtgagga 468
Query: 305 gttacaaaagtgagcaaggagattttacaggaagatgtgggagctgggaggaaaagtgaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gttacaaaagtgagcaaggagattttacaggaagatgtgggagctgggaggaaaagtgaa 408
Query: 365 acaagagtctaaagaagaaatacagaaagcaaggcccagttgtggaaaaactgcttattt 424
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 407 acaagagtctaaagaagaaatacagaaagc-attcccagttgtggaaaaactgcttattt 349
Query: 425 aatctgtcaatcattgatatggtaaatttcataaaaaccaatctcttcctaaccctatat 484
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 348 aatctgtcaatcattgatatggtaaatttcaaaaaaaccaatctcttcctaaccctatat 289
Query: 485 tttaaaattcatagttgggtttatttatgggaatcattcagcatgcccattcatatgtga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tttaaaattcatagttgggtttatttatgggaatcattcagcatgcccattcatatgtga 229
Query: 545 tttacttttttctcctttttttca 568
||||||||||||||||||||||||
Sbjct: 228 tttacttttttctcctttttttca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 967
Length adjustment: 10
Effective length of query: 558
Effective length of database: 957
Effective search space: 534006
Effective search space used: 534006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_o21.g1 MSMg01no351_o21.g1 CHROMAT_FILE:
MSMg01no351_o21.g1 PHD_FILE: MSMg01no351_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:17 2005
(444 letters)
>mm_chr15_47264983_47265826
Length = 844
Score = 828 bits (428), Expect = 0.0
Identities = 440/444 (99%)
Strand = Plus / Plus
Query: 1 ctttctaaatgatcaaattacagggatatgccaccaggccaaacaagcatcaatcactaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttctaaatgatcaaattacagggatatgccaccaggccaaacaagcatcaatcactaa 260
Query: 61 tgcttgaccttaaatgaataatggattctggtcaccagttcaaagctttctgatgatcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcttgaccttaaatgaataatggattctggtcaccagttcaaagctttctgatgatcat 320
Query: 121 tctgtagtgtcactctgttctcaaatatctatattcttctctacctccatgattaacaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgtagtgtcactctgttctcaaatatctatattcttctctacctccatgattaacaat 380
Query: 181 tgccctgtgaaatatttaaccgaaaagaactagaggacttttgataggctcacctgcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgccctgtgaaatatttaaccgaaaagaactagaggacttttgataggctcacctgcatt 440
Query: 241 taatcatacagggttttcctcattgctatgtattatgtatattgctatgtactttactgc 300
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 taatcatacagggtttgcctcattgctatgtattatgtatattgctatgtacattactgc 500
Query: 301 cagctcacattgcctttcttcataatggtccgagtgtttgccattttgatttcctttctg 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagctcacattgcatttcttcataatggtccgagtgtttgccattttgatttcctttctg 560
Query: 361 acaatatcattttagagatgagaagatgaatctcaaataaatgaactgtcgtggtttatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaatatcattttagagatgagaagatgaatctcaaataaatgaactgtcgtggtttatg 620
Query: 421 gaataagattacttctcttttgca 444
|||||||||| |||||||||||||
Sbjct: 621 gaataagattgcttctcttttgca 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
