Query= MSMg01no355_p02.b1 MSMg01no355_p02.b1 CHROMAT_FILE:
MSMg01no355_p02.b1 PHD_FILE: MSMg01no355_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:32 2005
(482 letters)
>mm_chr15_49728282_49729163
Length = 882
Score = 903 bits (467), Expect = 0.0
Identities = 476/479 (99%)
Strand = Plus / Minus
Query: 4 ggaattcttggatattatatcattaaatgtgttattttgtccattttcaaatatgactcc 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ggaattcttggacattatatcattaaatgtgttattttgtccattttcaaatatgactcc 623
Query: 64 aatcaacactggatatctcattattgccacaaatacatgtgagactagattcatattttg 123
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aatcagcactggatatctcattattgccacaaatacatgtgagactagattcatattttg 563
Query: 124 tattcttactactgccattattgttaatcacttttcagacataaataattacttttacat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tattcttactactgccattattgttaatcacttttcagacataaataattacttttacat 503
Query: 184 agtctcttaattcattacactgccacttttctttggtgaatactcatcttatatattggt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 agtctcttaattcattacactgccacttttctttggtgaatactcatcttatatattggt 443
Query: 244 ttaattttcaattgcaaaaatttttttctttgacctaaaataatatgcctgccttttcca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttaattttcaattgcaaaaatttttttctttgacctaaaataatatgcctgccttttcca 383
Query: 304 gacacagaagattccaattaagattcatgtattagatagtcctatagacacctagttaat 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gacacagaagattccaattaagattcatgtattagatagtcctatagacacctagttaaa 323
Query: 364 agtcctaaaatttgtgataagtataataaaatgtatcctgcaggagaggatgtgcaaaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agtcctaaaatttgtgataagtataataaaatgtatcctgcaggagaggatgtgcaaaat 263
Query: 424 atgataaattttttgacagaatccaatttgcttcttctctcactccaggacagcctagg 482
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atgataaattttttgacagaatccaatttgcttcttctctcactccaggacagcctagg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_p02.g1 MSMg01no355_p02.g1 CHROMAT_FILE:
MSMg01no355_p02.g1 PHD_FILE: MSMg01no355_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:32 2005
(503 letters)
>mm_chr15_49588739_49589641
Length = 903
Score = 826 bits (427), Expect = 0.0
Identities = 482/505 (95%), Gaps = 12/505 (2%)
Strand = Plus / Plus
Query: 1 aataaaacatgagtgtactcatagcactttatttggaaaattttgtaccttgaatttttt 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataaaacatgagtgtactcataacactttatttggaaaattttgtaccttgaatttttt 260
Query: 61 tagtttttgtgtctagtgtcaatgagaataaattgagtattagtgacaaaatgtttggta 120
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 tagtttttgtgtctagggtcaatgagaataaatggagtattagtgacaaaatgtttggta 320
Query: 121 agatatttaaattaaaaatatgattacatattatatattattataattgctaatatttta 180
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 321 agatatttaaattaaaaatatgattacatattatatgttattttaattgctaatatttta 380
Query: 181 ctgatattttctaaagttctttatatgtttgatagaaatgagttcaaattgtttttaaag 240
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 cttatattttctaaagttctttatatgtttgatagaaacgagttcaaattgtttttaaag 440
Query: 241 tcttttctttcattagtttcccatttttatttgctgtatacactttaaaattaaaagttt 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 tcttttctttcattagtttcccatttttatttgctgtatactctttaaaattaaaagttt 500
Query: 301 aagaatagaaattatagagcagaaaagaactaatccatcaattttatgtattctttttaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 aagaatagaaattatagagcagaaaagaactaatccatcaattttatgtattctttttta 560
Query: 361 ttttgagtcataatttttgtatctcatcaccatatttaatatacatatataaaactatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttgagtcataatttttgtatctcatcaccatatttaatatacatatataaaactatat 620
Query: 421 gtctaactatatataactatatatataactatataactatatatataactatatataact 480
|| |||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 621 gtgtaactatatataactatatatataactatata------tatataactatata--act 672
Query: 481 ctatataact-c-tatatatgtata 503
|||||||| | ||||||| ||||
Sbjct: 673 --atataactacatatatatatata 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
