Query= MSMg01no357_d17.b1 MSMg01no357_d17.b1 CHROMAT_FILE:
MSMg01no357_d17.b1 PHD_FILE: MSMg01no357_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:10 2005
(595 letters)
>mm_chr15_63518796_63519790
Length = 995
Score = 1050 bits (543), Expect = 0.0
Identities = 575/595 (96%), Gaps = 15/595 (2%)
Strand = Plus / Plus
Query: 1 ggctagcaacaagaaaggaaaacactccaacaccccaaatctttctaagtcagtacagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggctagcaacaagaaaggaaaacactccaacaccccaaatctttctaagtcagtacagca 260
Query: 61 actggaggatttaacacaaaattcctacccatgggatgatggccaagccaggagatagtg 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 actggaggatttaacacaaaattcctatccatgggatgatggccaagccaggagatagtg 320
Query: 121 taattacaggaggtaagatgtggaaaagaacaaatgaaaggaaagaccccagagctacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taattacaggaggtaagatgtggaaaagaacaaatgaaaggaaagaccccagagctacag 380
Query: 181 atggcaggaaacaatgaaagcacacactgatgcttctgtggtagagagaacgtcaggatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 atggcaggaaacaatgaaagcacacactgatgcttctgtggtagagagaacatcaggatt 440
Query: 241 taagtcgagatacttgtaaagacctttactcttgcgtgtttccattcgcatgggtatgca 300
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 taagtcaagatacttgtaaagacctttactcctgcgtgtttccattcgcatgggtatgca 500
Query: 301 tatagatgggttcacagttgatagttttactgaagtcagcaaacatgtagattgagcctg 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatagatgggttcacagttggtagttttactgaagtcagcaaacatgtagattgagcctg 560
Query: 361 ttctgggccaggctctgaaccacaccatgacagagaacaaaggttttcagctcagtgcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctgggccaggctctgaaccacaccatgacagagaacaaaggttttcagctcagtgcta 620
Query: 421 ttgacattttcaaccagataatttttcttttcttattgaaatggtcaaagtagacactgc 480
|||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgacatttt---------------tcttttcttattgaaatggtcaaagtagacactgc 665
Query: 481 cccatgcactgtaagatattaattaagcagtaatcctgactctgcctactaaataccaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 cccatgcactgtaagatattaattaagcagtaatcctgactctgcctactaaataccaat 725
Query: 541 agcaagatccatgtcctaccaaagctatctacaggaactgtctaatctccctgag 595
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 agcaagatccatgtcctaccaaagctatctacaggaactgtctaatctccctgag 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_d17.g1 MSMg01no357_d17.g1 CHROMAT_FILE:
MSMg01no357_d17.g1 PHD_FILE: MSMg01no357_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:10 2005
(461 letters)
>mm_chr15_63729310_63730170
Length = 861
Score = 861 bits (445), Expect = 0.0
Identities = 457/461 (99%)
Strand = Plus / Minus
Query: 1 tattcacccgcaaagatgtgtgaaactatgaaactttcaggaaaatgtgtgtactggaaa 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tattcacctgcaaagatgtgtgaaactatgaaactttcaggaaaatgtgtgtactggaaa 722
Query: 61 tattaatcctgaatgaggcaccccagactcagaaagacagatgcttcatgtcctgtctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tattaatcctgaatgaggcaccccagactcagaaagacagatgcttcatgtcctgtctca 662
Query: 121 gaccctgcgaggctgctgagttcagtaggtggtacctctagggtcccaaagagatgatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaccctgcgaggctgctgagttcagtaggtggtacctctagggtcccaaagagatgatga 602
Query: 181 gtaacaggacagaagatacagaagacatcacatggactgatagagataagctctggaatg 240
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 601 gtaacaggacagaagatacagaagacatcacatggattgatagagacaagctctggaatg 542
Query: 241 aggagaagcagcctaccccaacagctagctgagaatacaggtctatgtagaaacccagat 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aggagaagcagcctcccccaacagctagctgagaatacaggtctatgtagaaacccagat 482
Query: 301 gtgaatatgggtaaatcagagtgaaacctcaacattaggaggaggcaataaatcatatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgaatatgggtaaatcagagtgaaacctcaacattaggaggaggcaataaatcatatac 422
Query: 361 ctagtttggaaaactcaagacgttgcaatagggctgcggctatggctcagttgtaaatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctagtttggaaaactcaagacgttgcaatagggctgcggctatggctcagttgtaaatac 362
Query: 421 taggctggtacccatggtgctctgaattcaatctctaggcc 461
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taggctggtacccatggtgctctgaattcaatctctaggcc 321
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
