Query= MSMg01no357_p08.b1 MSMg01no357_p08.b1 CHROMAT_FILE:
MSMg01no357_p08.b1 PHD_FILE: MSMg01no357_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:06 2005
(464 letters)
>mm_chr15_92077527_92078390
Length = 864
Score = 791 bits (409), Expect = 0.0
Identities = 451/465 (96%), Gaps = 2/465 (0%)
Strand = Plus / Plus
Query: 1 aattttttgtttccttgttttgtttttgtttttg-tttttttgagacatggtctttctat 59
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 200 aattttttgtttccttgttttgtttttgtttttgttttttttgagacatggtctctctat 259
Query: 60 atagccctggctgtcctgcaactcattgtgcataccaggctggcctcgaactcatggcaa 119
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 260 atagccctggctgtcctgcaactcattgtgcatacgaggctggcctcgaactcatggcaa 319
Query: 120 tccccttgcatctttcttctgtgttttgtgttgttttcaactctggctcatgctctgctt 179
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 320 tccccttgcatctttcttctgtgttttgtgttgtttttaactctggctcatgctctgctt 379
Query: 180 tttctttttgctactttctccccaaaataaattttgatagagtcatttgaactctaaaaa 239
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttctttttgctacgttctccccaaaataaattttgatagagtcatttgaactctaaaaa 439
Query: 240 ttgatctttatatccaattgttttctctcttcattcactccaatttgttctcatcggcag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 440 ttgatctttatatccaattgttttctctcttcattcactccaatttgttctcatcagcag 499
Query: 300 ctctctgctgaaactgtttttgtgtaattactcagaatgtccattgctaaagctgatcga 359
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 500 ctctctgctgaaactgtttttgtgtaatcactcagaatgtccattgctaaagctgattga 559
Query: 360 ttctcagctgtatccaatcaaatcgaactccatgggcagtcacacttgatcctctcctct 419
|||||||||||||||||||| |||| |||||| || ||||||||||||||||||||||||
Sbjct: 560 ttctcagctgtatccaatcagatcggactccaagg-cagtcacacttgatcctctcctct 618
Query: 420 gcactacatcctctgtgcttagcacctggatcccacattccacgc 464
||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 619 gcactgcatcctctgtgcttagcacctggatcccacactccacgc 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_p08.g1 MSMg01no357_p08.g1 CHROMAT_FILE:
MSMg01no357_p08.g1 PHD_FILE: MSMg01no357_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:06 2005
(480 letters)
>mm_chr15_92246833_92247714
Length = 882
Score = 845 bits (437), Expect = 0.0
Identities = 471/483 (97%), Gaps = 4/483 (0%)
Strand = Plus / Minus
Query: 1 cttgagatttgaaaccctacccagactggccttgcagcaccaaatgttttgagtctgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 cttgagatttgaaaccctacccagactggccttgcagcaccaaatgttttgagtctgaga 623
Query: 61 tttttacatt-acacgatgctatctggatggaagggattcgcttatatacaaaacacata 119
||||||||| | | |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 622 -ttttacattaaaatgatgctgtctggatggaagggattcgcttatatacaaaacacata 564
Query: 120 cagaggccaagaaaaccaccccatgtcacttcccatagtcctaactgtcagacacatggc 179
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 563 cagaggccaagaaaaccaccccatgtcacttcccatagtcctaactgaaagacacatggc 504
Query: 180 tccctgaaaaccttcaagggcctc--aaaggaagctgtcaatcagaactgtgtttgctcc 237
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 503 tccctgaaaaccttcaagggcctcaaaaaggaagctgtcaatcagaactgtgtttgctcc 444
Query: 238 ttacaaaaactcacacttaaacttctcatcggcattacaattgtctggttcataaaaact 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttacaaaaactcacacttaaacttctcatcggcattacaattgtctggttcataaaaact 384
Query: 298 ggaatgtcactgtgcaccgtgtgacatatcgtgaacagctgttgccttttaacttaggaa 357
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggaatgtcacagtgcaccgtgtgacatatcgtgaacagctgttgccttttaacttaggaa 324
Query: 358 gataaaattttcctgccttcacctctaattaacgctttaacccgcaacacactctttccg 417
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 323 gataaaattttcctgccttcacccctaattaacgctttaacccgcaacacactctttccg 264
Query: 418 agtgagagcctttcaaatttgccttgagattagagtgatttttttttcaccatttatatc 477
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 263 agtgagagcctttcaaatttgccttgagattaaagtgatttttttttcaccatttatatc 204
Query: 478 caa 480
|||
Sbjct: 203 caa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 882
Length adjustment: 10
Effective length of query: 470
Effective length of database: 872
Effective search space: 409840
Effective search space used: 409840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
