Query= MSMg01no358_o22.b1 MSMg01no358_o22.b1 CHROMAT_FILE:
MSMg01no358_o22.b1 PHD_FILE: MSMg01no358_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:19 2005
(551 letters)
>mm_chr15_30746973_30747923
Length = 951
Score = 957 bits (495), Expect = 0.0
Identities = 534/547 (97%), Gaps = 2/547 (0%)
Strand = Plus / Minus
Query: 6 gaattctattacatattatcgcaggtttcctttctgctgctcattttcctgcaaatcaat 65
|||||||||||| ||| || | ||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gaattctattacgtatgat-gtaggtttcctttctgctgctcattttcctgcaaatcaat 693
Query: 66 gaaaatattgagagagtagcaatttgacttcctaattatcagctgttggactctcttgct 125
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 692 gaaaatattgagagagtagcaacttgacttcctaattatcagctgttggactctcttgct 633
Query: 126 atctaggttac-aaaaaaggactcagtctaacatcaggtagactgcccttagcaccagcc 184
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 632 atctaggttacaaaaaaaggactcagtctaacatcaggtagacttcccttagcaccagcc 573
Query: 185 atctggaacattctgcagattccctgagacagccatgcaaagatcgccccgacctcaact 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 572 atctggaacattctgcagattccctgagacagccatgcaaagatcgccccgaccccaact 513
Query: 245 tccctagctcctgatagtgaacagtcggaactagacttacccaatctcacattttcgtga 304
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 512 tccctagttcctgatagtgaacagtcggaactagacttacccaatctcacattctcgtga 453
Query: 305 gtcatttttattttggtcataatgggagtacttcccttggaggagagacaattatcactg 364
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gtcatttttattttggtcatagtgggagtacttcccttggaggagagacaattatcactg 393
Query: 365 ttaggaaaattatgactgctttgtaagccttcatgactgattggtccaggatcaaaggtt 424
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ttaggaaaattatggctgctttgtaagccttcatgactgattggtccaggatcaaaggtt 333
Query: 425 atctaaacaatagctttgactagtggacatattccttatccaggtatatgatcatgctgc 484
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 332 atctaaacaatagctttgactagtggacatattccttatccaggtatatgagcatgctgc 273
Query: 485 ttaatttactccatgaattggttgagagctaatctcttgttaccttccatgtgttgtcat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ttaatttactccatgaattggttgagagctaatctcttgttaccttccatgtgttgtcat 213
Query: 545 atctggt 551
|||||||
Sbjct: 212 atctggt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_o22.g1 MSMg01no358_o22.g1 CHROMAT_FILE:
MSMg01no358_o22.g1 PHD_FILE: MSMg01no358_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:19 2005
(490 letters)
>mm_chr15_30541197_30542087
Length = 891
Score = 911 bits (471), Expect = 0.0
Identities = 486/491 (98%), Gaps = 1/491 (0%)
Strand = Plus / Plus
Query: 1 tctcctccgctcctgctaacgctcagaaaggaagcat-ggagttcatcaacatctgaccg 59
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 tctcctccgctcctgctaatgctcagaaaggaagcattggagttcatcaacatctgaccg 260
Query: 60 aggtacagaggatgtcagagttgactgatcagcgtagcagtgagcagcccagtagagcta 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtacagaggatgtcagagttgactgatcagcgtagcagtgagcagcccagtagagctg 320
Query: 120 acacagaaacagcacaatggttcaattaaatgctttggagagtactttacaatagtaccc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacagaaacagcacaatggttcaattaaatgctttggagagtactttacaatagtaccc 380
Query: 180 ctagtgatcaaagattgcgacttatgttattccaatttgtgtaatgcccactggcagaga 239
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 ctagtgatcaaagattgcgacttatgttattccaatttgtggaatgcccactggcagaga 440
Query: 240 tattatgatagtttattttctaatgtggttagatatatgtctccaactacaataaatgcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattatgatagtttattttctaatgtggttagatatatgtctccaactacaataaatgcc 500
Query: 300 ttctgtactagtaaaattgtttaaaaataattcctagcccatgcatgagaaggttctcaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctgtactagtaaaattgtttaaaaataattcctagcccatgcatgagaaggttctcaa 560
Query: 360 gaatctgtgaaaggaaatatagtatgaggaattcatattttatagaaccccatttgttgc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaatctgtgaaaggaaatatagtatgaggaattcatattttatagaaccccatttgttgc 620
Query: 420 tccttccagtattggatattatacataatatgcctcttgtaatatagctacagtcaactc 479
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 tccttccagtattggatattatacataatatgcctcttgtaatatagctacggtcaactc 680
Query: 480 tgaatctataa 490
|||||||||||
Sbjct: 681 tgaatctataa 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 891
Length adjustment: 10
Effective length of query: 480
Effective length of database: 881
Effective search space: 422880
Effective search space used: 422880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
