Query= MSMg01no359_i17.b1 MSMg01no359_i17.b1 CHROMAT_FILE:
MSMg01no359_i17.b1 PHD_FILE: MSMg01no359_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:03 2005
(494 letters)
>mm_chr15_54263112_54264006
Length = 895
Score = 909 bits (470), Expect = 0.0
Identities = 486/492 (98%), Gaps = 3/492 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgctgtggcgattattatagtatgctgatgacctggaggggctcaagcaaata 63
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgctggggagattattatagtatgctgatgacctggaggggctcaagcaaata 263
Query: 64 aaatttagaaacttaaaattagtctattatagcttagcttagcttgtttttttttt--aa 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 264 aaatttagaaacttaaaattagtctattatagcttagcttagcttgttttttttttttaa 323
Query: 122 ataaatgtaagtagttattttttttaaatgaagaaatctcataaaacattcccaagacac 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ataaatgtaagtagttattttttttaaatgaagaaatctcataaaacattcccaagacac 383
Query: 182 taaaaaaacaacattgaaatgaggggcttctttccggtgcttgtttttatgtctcccttc 241
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taaaaaa-caacattgaaatgaggggcttctttccggtgcttgtttttatgtctcccttc 442
Query: 242 tgttttcactaaagtaactctcaaagattaaatagccagaaccccagtggaagactaaga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgttttcactaaagtaactctcaaagattaaatagccagaaccccagtggaagactaaga 502
Query: 302 cacaggttgtttacttcagctcttgcaggcaggctggtgcagtcatttaggtcacaggaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cacaggttgtttacttcagctcttgcaggcaggctggtgcagtcatttaggtcacaggaa 562
Query: 362 ctataatcgtgtttctctcttttaggatctttcatcagaagccaccagggagcagcaaat 421
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctataatcttgtttctctcttttaggatctttcatcagaagccaccagggagcagcaaat 622
Query: 422 gactaaatcactcaccttgcctccaccagtgagacacttgcttggaaatgaatgagagat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gactaaatcactcaccttgcctccaccagtgagacacttgcttggaaatgaatgagagat 682
Query: 482 atcccagtgagg 493
||||||||||||
Sbjct: 683 atcccagtgagg 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 895
Length adjustment: 10
Effective length of query: 484
Effective length of database: 885
Effective search space: 428340
Effective search space used: 428340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_i17.g1 MSMg01no359_i17.g1 CHROMAT_FILE:
MSMg01no359_i17.g1 PHD_FILE: MSMg01no359_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:03 2005
(418 letters)
>mm_chr15_54450397_54451214
Length = 818
Score = 793 bits (410), Expect = 0.0
Identities = 416/418 (99%)
Strand = Plus / Minus
Query: 1 agtaccttgccttttccctctctgtgaattgatggtgttggaaacaaacggtcctatccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 agtaccttgccttttccctctctgtgaattgatggtgttggaaacaaacggtcctatccc 559
Query: 61 ttttgccacactgcctgtgttctcatctcattccccagcttttcactgattggctcccat 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ttttgccacactacctgtgttctcatctcattccccagcttttcactgattggctcccat 499
Query: 121 tagtctatgaatgatgctccagcatttggtgggctgagttttctcccctgctctttcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tagtctatgaatgatgctccagcatttggtgggctgagttttctcccctgctctttcttt 439
Query: 181 actgcttctagtcaagcggtacagaccctctgtacatagtcttcctttatttttattggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 actgcttctagtcaagcggtacagaccctctgtacatagtcttcctttatttttattggt 379
Query: 241 ctgctttccctctccctgctctgtactgttccttttctcttgttctgcatgttttcattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctgctttccctctccctgctctgtactgttccttttctcttgttctgcatgttttcattg 319
Query: 301 gtgagttcatggattgcctactgagtttatcggcttcctgttgtttgaacaaagtacccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtgagttcatggattgcctactgagtttatcggcttcctgttgtttgaacaaagtacccg 259
Query: 361 agattatcaccttaaaaagaattacttttggttcacactttggaagatttttggccaa 418
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 258 agattatcaccttaaaaagaattacttttggttcacactttgaaagatttttggccaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
