Query= MSMg01no361_b05.b1 MSMg01no361_b05.b1 CHROMAT_FILE:
MSMg01no361_b05.b1 PHD_FILE: MSMg01no361_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:00 2005
(613 letters)
>mm_chr15_26815739_26816751
Length = 1013
Score = 1154 bits (597), Expect = 0.0
Identities = 606/609 (99%)
Strand = Plus / Minus
Query: 5 gaattccaggctagcgatgactatggaatgagcatgatcctgtcttaaaaataagtaagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 gaattccaggctagcgatgactatggaatgagcatgatcctgtcttaaaaataagtaagc 836
Query: 65 aagtaagtagataattaaataaacccaataacaggtcctgggtgcttactagtcactggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 aagtaagtagataattaaataaacccaataacaggtcctgggtgcttactagtcactggg 776
Query: 125 catgtcgcacacccattctacagttcttaggcagccagtgaggagacacttgtattccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 catgtcgcacacccattctacagttcttaggcagccagtgaggagacacttgtattccca 716
Query: 185 tttcataaacatacaagtttggaagttgttaggccctgggcttacagcaggtgagggact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tttcataaacatacaagtttggaagttgttaggccctgggcttacagcaggtgagggact 656
Query: 245 ggtggcaccatgcatggaacccatggctgtcctggagcccctgcttcctgtcactgtgct 304
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ggtggcactatgcatggaacccatggctgtcctggagcccctgcttcctgtcactgtgct 596
Query: 305 catggtcttgatacttcggtggcagctaaaaccctttcggcctttgtattacttattgtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 catggtcttgatacttcggtggcagctaaaaccctttcggcctttgtattacttattgtt 536
Query: 365 tcaaagaacctcggtgacaggagtagctgagtgggggaaagagtggtggttttatggagt 424
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 535 tcaaagaacctcggtgacaggagtagctgagtggggggaagagtcgtggttttatggagt 476
Query: 425 agctggacaaaacatgaaagacctattctgaaggaagcatttattcaacgttgtgtggct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 agctggacaaaacatgaaagacctattctgaaggaagcatttattcaacgttgtgtggct 416
Query: 485 cagcaaagggcagattaactgctcattaggagtcaatctgctgacaaattggcagactat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cagcaaagggcagattaactgctcattaggagtcaatctgctgacaaattggcagactat 356
Query: 545 ctggtatctaataatgttagcatataaaataattagcacgttccttggagtctgcagagt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ctggtatctaataatgttagcatataaaataattagcacgttccttggagtctgcagagt 296
Query: 605 gtaaagcag 613
|||||||||
Sbjct: 295 gtaaagcag 287
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_b05.g1 MSMg01no361_b05.g1 CHROMAT_FILE:
MSMg01no361_b05.g1 PHD_FILE: MSMg01no361_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:00 2005
(508 letters)
>mm_chr15_26628768_26629675
Length = 908
Score = 905 bits (468), Expect = 0.0
Identities = 504/524 (96%), Gaps = 16/524 (3%)
Strand = Plus / Plus
Query: 1 ctcttccatacctgcttggtgagtcaaggcatacatcacccaggcaagcaactggagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ctcttccatacctgcttggtgagtcaaggcatacatcacccaggcaagcaactggagcat 244
Query: 61 cccaagaggcaaacattacctacaaaatcacaactcttgggaaacacttatatgtttacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cccaagaggcaaacattacctacaaaatcacaactcttgggaaacacttatatgtttacc 304
Query: 121 aaggtattaaaatgtatgcagtcctctgcagcagattttttttttgagactgaattattt 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agggtattaaaatgtatgcagtcctctgcagcagattttttttttgagactgaattattt 364
Query: 181 catgtaagaagattctgtacctatattctgtgtaagactttgaaagtaataaatatttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 catgtaagaagattctgtacctatattctgtgtaagactttgaaagtaataaatatttac 424
Query: 241 tcgtctcactatttggctaaccaaggctaattagtcagttccagacaagtgggagataag 300
|| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 425 tcatctcactatctggctaaccaaagctaattagtcagttccagacaagtgggagataag 484
Query: 301 tagatgatgtgtgtgcacacacacatcagagagagagagagagagag--agagaga-a-- 355
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 485 tagatgatgtgtgtgcacacacacatcagagagagagagagagagaggcagagagagaga 544
Query: 356 -agagagagagagagagagagagagagagagagagagaa----------aaggagagaga 404
|||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 545 gagagagagagagagagagagagagagagagagagagaaggagagagagaaggagagaga 604
Query: 405 taagctagaaaatagttatcaaatatcatacatgagtatgataagctctaaacaaactat 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 taagctagaaaatagttatcaaatatcatacatgagtatgataagctctaaacaaactat 664
Query: 465 atcttagtttgtgaatatggaggactatgattgaggatatatgt 508
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 atcttagtttgtgaatatggaggactatgattgaggatatatgt 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
