Query= MSMg01no361_p01.b1 MSMg01no361_p01.b1 CHROMAT_FILE:
MSMg01no361_p01.b1 PHD_FILE: MSMg01no361_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:07 2005
(579 letters)
>mm_chr15_91659806_91660784
Length = 979
Score = 984 bits (509), Expect = 0.0
Identities = 515/517 (99%)
Strand = Plus / Minus
Query: 63 acaagggtatatattcacaagggcataggaaaaaatgaatctcactaaaaacagataaat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 acaagggtatatattcacaagggcataggaaaaaatgaatctcactaaaaacagataaat 920
Query: 123 aggaacaaattcagtattaaagaagcaccaacacaaggaactagtgcgtgttttcctgta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 aggaacaaattcagtattaaagaagcaccaacacaaggaactagtgcgtgttttcctgta 860
Query: 183 acaaccctgcgtataaatggtctaactctctctctatttaaatggcagggactccccatt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 acaaccctgcgtataaatggtctaactctctctctatttaaatggcagggactccccatt 800
Query: 243 ggattgaaaaacaagacccaggacttgtgtatacaggtgtcaccactaaagtgtgggcag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ggattgaaaaacaagacccaggacttgtgtatacaggtgtcaccactaaagtgtgggcag 740
Query: 303 ctgtcttcccctaagtaaaccatatagatttctctcctgagtgccaagattgttcacctg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ctgtcttcccctaagtaaaccatatagatttctctcctgagtgccaagattgttcacctg 680
Query: 363 gccgaggaacttgactctcaaaaaatgttggatgttagattgtgttacaaggagaatcac 422
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 679 gccgaggaacttgactctcaaaaaatgttggatgtcagattgtgttacaaggagaatcat 620
Query: 423 caactcaagcaagcaaaatcagtatttttctgagccacaatgaacctgctgagaaattgg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 caactcaagcaagcaaaatcagtatttttctgagccacaatgaacctgctgagaaattgg 560
Query: 483 aataacaatcccgtgcccctacccaagccccagggacaccaggaagattgagtgatgaca 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aataacaatcccgtgcccctacccaagccccagggacaccaggaagattgagtgatgaca 500
Query: 543 accttaactgcctctaaagtataataacttcaggaag 579
|||||||||||||||||||||||||||||||||||||
Sbjct: 499 accttaactgcctctaaagtataataacttcaggaag 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_p01.g1 MSMg01no361_p01.g1 CHROMAT_FILE:
MSMg01no361_p01.g1 PHD_FILE: MSMg01no361_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:08 2005
(371 letters)
>mm_chr15_91488545_91489316
Length = 772
Score = 644 bits (333), Expect = 0.0
Identities = 357/365 (97%), Gaps = 1/365 (0%)
Strand = Plus / Plus
Query: 1 tgggttacagtgttctacctgtgtcacttagcattaagtgttcagtctcatccaacagtg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tgggttacagtgttctacctgtgtcacttagcattaagtgttcagtctcacccaacagtg 260
Query: 61 tgtgaggctgctccctcccagagagaactgaaactaatgacacgctgtgcgagtcggcag 120
|||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 tgtggggctgctccttcccagagagaactgaaactaatgacacgccatgcgagtcggcag 320
Query: 121 ccccaacagagttctgagtttatcatccaaggaagaagatgggtggaaacatgagaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccccaacagagttctgagtttatcatccaaggaagaagatgggtggaaacatgagaaaca 380
Query: 181 tcttcagtcacacagcctccctaccctgaatgccaagcgccctcgtagaatacaggccct 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 tcttcagtcacacagcctccctaccctgaatgccaagcaccctcgtagaatacaggccct 440
Query: 241 gtggtcattggtgtaa-tgagaggacagtgaggacccacaggacagcacagggggtacct 299
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 gtggtcattggtgtaaatgagaggacagtgagtacccacaggacagcacagggggtacct 500
Query: 300 tacaggacagagcaagcacagcatttatacacagcattcatttcttctttgcttgctgct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacaggacagagcaagcacagcatttatacacagcattcatttcttctttgcttgctgct 560
Query: 360 gtctt 364
|||||
Sbjct: 561 gtctt 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 772
Length adjustment: 9
Effective length of query: 362
Effective length of database: 763
Effective search space: 276206
Effective search space used: 276206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
