Query= MSMg01no363_f19.b1 MSMg01no363_f19.b1 CHROMAT_FILE:
MSMg01no363_f19.b1 PHD_FILE: MSMg01no363_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:02 2005
(586 letters)
>mm_chr15_98256182_98257167
Length = 986
Score = 994 bits (514), Expect = 0.0
Identities = 570/590 (96%), Gaps = 5/590 (0%)
Strand = Plus / Plus
Query: 1 aaatagctaagtgaaatttaaaagttatggaaagaataaaagggaggatttattataaaa 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 201 aaatagctaagtgaaatttaaaagttatggaaagtataaaagggaggatttattttaaaa 260
Query: 61 cagaaagtctgagaacaactgagcaagcgtctggcaatggcgaacatgatacatccagta 120
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 cagaaactctgagaacaactgagcaagcgtctggcaatggcgaacacgatacatccagta 320
Query: 121 aagagtcccatagagagcctcaccaatagaat-ggatcatagagaagccaagacctgagc 179
|||||| ||||||||| |||||||||||| || ||||||||||||| |||||||||||||
Sbjct: 321 aagagttccatagagaacctcaccaatag-ataggatcatagagaatccaagacctgagc 379
Query: 180 cggagggcagggtggaggagttgcacaattcgaacaaaaacaaaaataagtt---aagaa 236
| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 380 cagagggcagggtggaggagttgcacaatttgaacaaaaacaaaaataagttaagaagaa 439
Query: 237 ggtacaatcgatgcttccaagatatacaaggcactatgaaaagaacacatctaagattca 296
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggtacaatcgatacttccaagatatacaaggcactatgaaaagaacacatctaagattca 499
Query: 297 tgggcctagaagaagaatttcattctactgttatagaaaacattttcaacaaaaccagac 356
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgggcatagaagaaggatttcattctactgttatagaaaacattttcaacaaaaccagac 559
Query: 357 aaacttcccaaattatcgaaagatgtactaatctggatacagggagcatttataacatct 416
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 560 aaacttcccaaattatcgaaagatgtactaatctagatacagggagcatttataacatct 619
Query: 417 aacagaaagaatctccattcatcataatagttcaaccacaaacacacaaaaggaagtata 476
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aacagaaagaatctccatttatcataatagttcaaccacaaacacacaaaaggaagtata 679
Query: 477 ctgaaaacaaaacaccaagtcacatataaagggcccattagaataacaacacctgctctc 536
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttgaaaacaaaacaccaagtcacatataaagggcccattagaataacaacacctgctctc 739
Query: 537 gacactttaaaatcaagatttattatgatatataccgagttctgaaagca 586
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gacactttaaaatcaagatttattatgatatataccgagttctgaaagca 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_f19.g1 MSMg01no363_f19.g1 CHROMAT_FILE:
MSMg01no363_f19.g1 PHD_FILE: MSMg01no363_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:02 2005
(451 letters)
>mm_chr15_98399053_98399903
Length = 851
Score = 841 bits (435), Expect = 0.0
Identities = 447/451 (99%)
Strand = Plus / Minus
Query: 1 acaccagagttgacagcagcctctcctacctgctaagccacctcgaggggaccctcattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 acaccagagttgacagcagcctctcctacctgctaagccacctcgaggggaccctcattt 592
Query: 61 atgcagacacatttcccagaggacttctggcgaaaaaaatagcccccaaatcttcaagat 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 591 atgcagacacatttcccagaggacttctggcgaaaaaaatagaccccaaatcttcaagat 532
Query: 121 tgattgccaatccccttgctagtgggtggatacagtgggctcttggtaaacaaaagattt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 531 tgattgccaatccccttgctagtgggtggatacagtgggctcttggtaaacaaaagatct 472
Query: 181 agagtttgggattgtgtgaacatcaataccgagttcaaggcagcgaccgaggcccgggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 agagtttgggattgtgtgaacatcaataccgagttcaaggcagcgaccgaggcccgggga 412
Query: 241 cagagacaccctggtgcagccaggaggctgaggcggacatcggccccagcttgcttttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cagagacaccctggtgcagccaggaggctgaggcggacatcggccccagcttgcttttta 352
Query: 301 caacctcacaaagtggacctgggagtgaggccagagcacaaattatctcttgatctcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 caacctcacaaagtggacctgggagtgaggccagagcacaaattatctcttgatctcctt 292
Query: 361 cttctgataatcctccccaatgcaggacacaaattatctccagatctccttcgcttgata 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 291 cttctgataatcctccccaatgcaggacacaaattatctcctgatctccttcgcttgata 232
Query: 421 acctttccctacagggtgggtttcctagaac 451
|||||||||||| ||||||||||||||||||
Sbjct: 231 acctttccctacggggtgggtttcctagaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
