Query= MSMg01no364_m17.b1 MSMg01no364_m17.b1 CHROMAT_FILE:
MSMg01no364_m17.b1 PHD_FILE: MSMg01no364_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:02 2005
(454 letters)
>mm_chr15_18329636_18330489
Length = 854
Score = 832 bits (430), Expect = 0.0
Identities = 445/454 (98%), Gaps = 8/454 (1%)
Strand = Plus / Plus
Query: 5 gaattcttaagtgtattcca----gggagaacagaaatgaaaataaaagacttgactatt 60
||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttaagtgta----aaaaagggagaacagaaatgaaaataaaagacttgactatt 260
Query: 61 ggtgccgtctatgtctttaagcaagcagccacacttttcaccctgaatgatgagtccctt 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 ggtgccgtctatgtctttaagcaagcagccacactattcaccctgaatgatgagtccctt 320
Query: 121 aattctgagttgtgacttggtgctaaagggcacattggtatgtttcctccttaactgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattctgagttgtgacttggtgctaaagggcacattggtatgtttcctccttaactgtga 380
Query: 181 aattcttcacttttattgtttctcactcgcactttcaaaccttgcaaatgctgtattatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattcttcacttttattgtttctcactcgcactttcaaaccttgcaaatgctgtattatt 440
Query: 241 gcactattatataacaaaatcactgctatctctcactttcctgtactgatctatgcacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcactattatataacaaaatcactgctatctctcactttcctgtactgatctatgcacag 500
Query: 301 caccttctgtcaaataagtcaggacccccgtgtctgacaaaatcaattcatcaaaactgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caccttctgtcaaataagtcaggacccccgtgtctgacaaaatcaattcatcaaaactgc 560
Query: 361 tgggcttcctactaatcatctttctcgcaatgtattacaaagcacattagcagcctttag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgggcttcctactaatcatctttctcgcaatgtattacaaagcacattagcagcctttag 620
Query: 421 tgtttcagcttgggtgcagcaaaacaactttgtg 454
||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtttcagcttgggtgcagcaaaacaactttgtg 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_m17.g1 MSMg01no364_m17.g1 CHROMAT_FILE:
MSMg01no364_m17.g1 PHD_FILE: MSMg01no364_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:02 2005
(451 letters)
>mm_chr15_18500808_18501657
Length = 850
Score = 820 bits (424), Expect = 0.0
Identities = 445/452 (98%), Gaps = 3/452 (0%)
Strand = Plus / Minus
Query: 1 tctttgttttatcctttctgtttaatctattttaattctattacacaaataacatataca 60
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 650 tctttgttttatcctttttgtttaatctattttaattttattacacaaataacatataca 591
Query: 61 tgggtattataaaccattattattactgtaattaattatattatttagagttttttggtt 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 taggtattataaaccattattattactgtaattaattatattatttagagttttttggtt 531
Query: 121 tatgtaaccttggtcatttaaatttttatctacacattgtaatcttatccatgaccatca 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 530 tatgtaaccttggtcatttaaa-ttttatctacacattgtaatcttatccatgaccatca 472
Query: 181 acaaaaagagaattccagattttgtgttcca-aaggcatgaaatctgcagaataaattta 239
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 471 acaaaaagagaattccagattttgtgtt-cagaaggcatgaaatctgcagaataaattta 413
Query: 240 ttgattgctgtcctataaaacattgaatattttaacttactagcctattacattttagct 299
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 412 ttgattgctgtcctataaaacattgaattttttaacttactagcctattacattttagct 353
Query: 300 cagtcttttgaaatattttcttttaataatttaaagtgtccttgtaatgcctttgtttgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 cagtcttttgaaatattttcttttaataatttaaagtgtccttgtaatgcctttgtttgt 293
Query: 360 gttttgcttaatacaccactaaatattttatttaaaacttcataaatatagtatatcaac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gttttgcttaatacaccactaaatattttatttaaaacttcataaatatagtatatcaac 233
Query: 420 aacacataaataaatgttctggactcttgtga 451
||||||||||||||||||||||||||||||||
Sbjct: 232 aacacataaataaatgttctggactcttgtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 850
Length adjustment: 10
Effective length of query: 441
Effective length of database: 840
Effective search space: 370440
Effective search space used: 370440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
