Query= MSMg01no365_h04.b1 MSMg01no365_h04.b1 CHROMAT_FILE:
MSMg01no365_h04.b1 PHD_FILE: MSMg01no365_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:57 2005
(483 letters)
>mm_chr15_70947763_70948645
Length = 883
Score = 810 bits (419), Expect = 0.0
Identities = 463/479 (96%), Gaps = 3/479 (0%)
Strand = Plus / Minus
Query: 5 gaattctctccttcactccatccaaaactgatgtctttctacattgaacataacctgttt 64
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 816 gaattctctgcttcactccatccaaaactgatgtctttctacatcgaacataacctgttt 757
Query: 65 attgcttcaattcccacgttttacttcgaacagtgttatatgatgtcaatcactttattt 124
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 756 attgcttcaattcccatgttttacttcgaacagtgttatatgatgtcaatcact---ttt 700
Query: 125 ttttttttttttttggacaggattctatgcttccagaggagattcttagctcaggatgga 184
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ttttttttttttttgtacaggattctatgcttccagaggagattcttagctcaggatgga 640
Query: 185 atgattctgtacaagttgactatgtttctagctattaggactattcatcgccaagaacta 244
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 639 atgattctgtacaagttgactatgtttctagctactaggactattcatcgccaagaaata 580
Query: 245 ttatgagctagctattaggactgctcatcgattataactagaacttagtgaggaagcaaa 304
||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||
Sbjct: 579 ttatgagctagctattaggactgttcatcgacaagaactagaacttagtgaggaagcaaa 520
Query: 305 cacaacatagcaatcttaaaaatacatgaacaaatatcagcttaattttttttcacacca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cacaacatagcaatcttaaaaatacatgaacaaatatcagcttaattttttttcacacca 460
Query: 365 ccccttgatatttcacttcatatcagtggaaaagttagtaacacacagataaaagttaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ccccttgatatttcacttcatatcagtggaaaagttagtaacacacagataaaagttaaa 400
Query: 425 gttatattgtcttgtcatattttaacctatgttattctcattgctgctaacagcttttg 483
|||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 399 gttatattgtcttgccatgttttaacctatgttattctcattgctgttaacagcttttg 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space: 412929
Effective search space used: 412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_h04.g1 MSMg01no365_h04.g1 CHROMAT_FILE:
MSMg01no365_h04.g1 PHD_FILE: MSMg01no365_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:57 2005
(547 letters)
>mm_chr15_70773955_70774901
Length = 947
Score = 1023 bits (529), Expect = 0.0
Identities = 540/545 (99%), Gaps = 3/545 (0%)
Strand = Plus / Plus
Query: 1 aagaaattattacagctctagatgctgagatagtgactattgagaattcacccacaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aagaaattattacagctctagatgctgagatagtgactattgagaattcacccacaaaca 263
Query: 61 agacagtggatagttccaaatccatgttcatacagacaaccctggttaaactcaggggct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 264 agacagtggatagttccaaatccatgttcatacagacaaccctggttaaactcagggggt 323
Query: 121 cataaaatataataataataataataataataataataataataataataataaatacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 324 cataaaatataataataataataataataataataataataataataataa---atacag 380
Query: 181 caagaacaagaaaagcagaaatttgagaatgagaattggaggaaaagtggggatagttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagaacaagaaaagcagaaatttgagaatgagaattggaggaaaagtggggatagttta 440
Query: 241 cagggaagggagtgagaaaagagaggcttggatgtgggagtaaccacaatgtgtttgtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagggaagggagtgagaaaagagaggcttggatgtgggagtaaccacaatgtgtttgtta 500
Query: 301 aacacatcaatgaaagagtcaaatgttaatcaaaattataataataaaaagaaaataaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacacatcaatgaaagagtcaaatgttaatcaaaattataataataaaaagaaaataaag 560
Query: 361 gtcaaaactactgaaacatataagaagcctcagagatggtgcttggaagaagcatactta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtcaaaactactgaaacatataagaagcctcagagatggtgcttggaagaagcatactta 620
Query: 421 tttggtttctaaagtttaaagctagtttttacatcagtgcgatttaaaagaaaatggatt 480
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 tttggtttctaaagtttaaagctagtttttatatcagtgcgatttaaaagaaaatggatt 680
Query: 481 catgttttctgagaaaggaaaatcaaatgaatgttggattatttagtgtgagtcatgagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catgttttctgagaaaggaaaatcaaatgaatgttggattatttagtgtgagtcatgagc 740
Query: 541 actgg 545
|||||
Sbjct: 741 actgg 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
