Query= MSMg01no366_a05.b1 MSMg01no366_a05.b1 CHROMAT_FILE:
MSMg01no366_a05.b1 PHD_FILE: MSMg01no366_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:42 2005
(515 letters)
>mm_chr15_35184812_35185721
Length = 910
Score = 897 bits (464), Expect = 0.0
Identities = 501/516 (97%), Gaps = 7/516 (1%)
Strand = Plus / Minus
Query: 1 atggatgagcggaagatgctggcacaatcttgtctttcgttgttggaaagtaaactctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 atggatgagcggaagatgctggcacaatcttgtctttcgttgttggaaagtaaactctga 651
Query: 61 attagtcaatgtgtttaagcccacctggctcaagttcagctgtctggcctgaggaaaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 attagtcaatgtgtttaagcccacctggctcaagttcagctgtctggcctgaggaaaagg 591
Query: 121 tttaaccagctaaattacagaggccagaaggtctgcctagcaggactcaacagaaaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tttaaccagctaaattacagaggccagaaggtctgcctagcaggactcaacagaaaacaa 531
Query: 181 ttactggtgtgctaactcaaagtttcctttttcagatttcaccgagaccggaaacagtct 240
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 530 tcactggtgtgctaactcaaagtttcctttttcagatttcaccgagaccggaaacattct 471
Query: 241 agttaatacacacacataaaagttgggtctcaatagagatct-tcccccctcctttagca 299
||||||||||||||||||||||| ||| |||||||||| |||||| ||||||||||
Sbjct: 470 agttaatacacacacataaaagt-----ctcgatagagatctctccccc-tcctttagca 417
Query: 300 tctgagtgtgtgacacctgagccataggttgtttgtgggactatggatgcatagcccctg 359
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 416 tctgagtgtgtgacacctgagccataggttgtttgtgggactatcgatgcatagcccctg 357
Query: 360 gtactttactcagtttggattgtttatacgttcacttctggttttctttggagaaaagac 419
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gaactttactcagtttggattgtttatacgttcacttctggttttctttggagaaaagac 297
Query: 420 tctgctgctctataaagtgtggggactgctggcttatacagaggtgtacagcctcacctg 479
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 296 tctgctgctctataaagtgtggggactgctggcttagacagaggtgtacagcctcatctg 237
Query: 480 tactgtgtaagtcaagttaatgatcctatgagtcca 515
||||||||||||||||||| ||||||||||||||||
Sbjct: 236 tactgtgtaagtcaagttactgatcctatgagtcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 910
Length adjustment: 10
Effective length of query: 505
Effective length of database: 900
Effective search space: 454500
Effective search space used: 454500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_a05.g1 MSMg01no366_a05.g1 CHROMAT_FILE:
MSMg01no366_a05.g1 PHD_FILE: MSMg01no366_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:43 2005
(443 letters)
>mm_chr15_35060609_35061451
Length = 843
Score = 806 bits (417), Expect = 0.0
Identities = 438/445 (98%), Gaps = 2/445 (0%)
Strand = Plus / Plus
Query: 1 ggctagtaaatctgcttttctcattgctgcatccaagtatggcttcccagccaa-aaa-a 58
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 199 ggctagtaaatctgcttttctcattgctgcatccaagtatggcttcccagccaataaaga 258
Query: 59 aagatgttgaaaaggaacaggcgacgtaacttaataaaacactggacctgctattcctgg 118
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 259 aagatgttgaaaaggaacaggcgatgtaacttaataaaacactggacctgctattcctgg 318
Query: 119 tgacaaaggctgaggtagaggaaccacaggtttaaaggcaatctgaactgaagaatgagt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgacaaaggctgaggtagaggaaccacaggtttaaaggcaatctgaactgaagaatgagt 378
Query: 179 tcaagagaagccaggcaaattagtgacaccctgtcccaaaacaaaacttgagaggaccaa 238
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcaagagaagccaagcaaattagtgacaccctgtcccaaaacaaaacttgagaggaccaa 438
Query: 239 ggtggtctctcaggggtaaagcactttcctagcacacaaggccctagattcaatccctag 298
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ggaggtctctcaggggtaaagcactttcctagcacacaaggccctagattcaatccctag 498
Query: 299 tatggagctagggagtggggaagcgaagagtacagaagatgacacctatagcaggtgaca 358
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 499 tatggagctagggagtggggaagcgaagagtacagaaggtgacacctatagcaggtgaca 558
Query: 359 cctaaggcatgagcaccactttcttcatgagtgggattaaactccataaaaggtttcaca 418
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 559 cctaaggcatgagcaccactttcttcacgagtgggattaaactccataaaaggtttcaca 618
Query: 419 gagcgctctgctttctgccctatgg 443
|||||||||||||||||||||||||
Sbjct: 619 gagcgctctgctttctgccctatgg 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
