Query= MSMg01no367_a08.b1 MSMg01no367_a08.b1 CHROMAT_FILE:
MSMg01no367_a08.b1 PHD_FILE: MSMg01no367_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:03 2005
(498 letters)
>mm_chr15_26226623_26227519
Length = 897
Score = 920 bits (476), Expect = 0.0
Identities = 490/495 (98%), Gaps = 1/495 (0%)
Strand = Plus / Minus
Query: 4 ggaattctattctgtgtcatattgtgggtgagggtgaccaccacacccttactatcaatt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 ggaattctattctgtgtcatattgtgggtgagggtgaccaccacacccttactatcaatt 638
Query: 64 gacacctgtacagattgccttatgctgactagggagggaagagaaggtctaagagatgag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gacacctgtacagattgccttatgctgactagggagggaagagaaggtctaagagatgag 578
Query: 124 aagaggatactgtgtgaatacaagacccctagggtggtatcagtaatgtactgaagactg 183
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 577 aagaggatactgtgtgaatacaagacccctagggtggtatcggtaatgtactgaagactg 518
Query: 184 taagccagaattcaaaacattttaaatccctaagtactaacaaagaagagtatgcaactg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 taagccagaattcaaaacattttaaatccctaagtactaacaaagaagagtatgcaactg 458
Query: 244 atataacatataagctccaaagattaaaatatttactgtacaggtttttaatagagagaa 303
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 457 atataacatataagctccaaagattaaaatatttactgtacaggttttt-atagagagaa 399
Query: 304 aaaaagacacctagctgcctttaaacagcacaaggttcatgaaaggattctgaggttcaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aaaaagacacctagctgcctttaaacagcacaaggttcatgaaaggattctgaggttcaa 339
Query: 364 ggagatgaatacgccttaaacaaacgttgcctggccaacactgccaagagaattgtattt 423
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ggagatgaataagccttaaacaaacgttgcctggccaacactgccaagagaattgtattt 279
Query: 424 aaggaggaccaggctgcaggagggtgagaaaaggcatcttagcagagctcanattggtct 483
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 278 aaggaggaccaggctgcaggagggtgagaaaaggcatcttagcagagctcaaattggtct 219
Query: 484 tcatgtttctgcccc 498
|||||| ||||||||
Sbjct: 218 tcatgtctctgcccc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 897
Length adjustment: 10
Effective length of query: 488
Effective length of database: 887
Effective search space: 432856
Effective search space used: 432856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_a08.g1 MSMg01no367_a08.g1 CHROMAT_FILE:
MSMg01no367_a08.g1 PHD_FILE: MSMg01no367_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:03 2005
(491 letters)
>mm_chr15_26081903_26082793
Length = 891
Score = 942 bits (487), Expect = 0.0
Identities = 490/491 (99%)
Strand = Plus / Plus
Query: 1 atccaaatgccaagagaatacaagacaaaaaacatcttagagagttccagtgtacatgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atccaaatgccaagagaatacaagacaaaaaacatcttagagagttccagtgtacatgag 260
Query: 61 cagatgctaaaacattgcatttgatttgatcttgtaatgtgtggaatctttcactgagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagatgctaaaacattgcatttgatttgatcttgtaatgtgtggaatctttcactgagtt 320
Query: 121 ttaagaaaatggatgccaggcctatgagccagcttctccagaagacacccactaatatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaagaaaatggatgccaggcctatgagccagcttctccagaagacacccactaatatct 380
Query: 181 cttggagccgaggcctggctcagctatggttccccacaggaaacaggtaaagcaccaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttggagccgaggcctggctcagctatggttccccacaggaaacaggtaaagcaccaact 440
Query: 241 gaggagaaaagaaaacaccaaagcaatctgtaaaagaaaacaatctattctgcagctgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggagaaaagaaaacaccaaagcaatctgtaaaagaaaacaatctattctgcagctgtg 500
Query: 301 gcttctgcgccatttagccacaggttctgaacaggaggaatcctgggtcttcttgcagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcttctgcgccatttagccacaggttctgaacaggaggaatcctgggtcttcttgcagaa 560
Query: 361 gctgcagaggtcttcacatagatttccacctgattttgtctcaggaccagctgtcagatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 gctgcagaggtcttcacatagatttccacctgattttgtctcaggaccagctgacagatc 620
Query: 421 cagcgttccgtcttggcagtttcaaaagctcattgccagaagaggcatcgggttgttcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagcgttccgtcttggcagtttcaaaagctcattgccagaagaggcatcgggttgttcct 680
Query: 481 ggccgcttctc 491
|||||||||||
Sbjct: 681 ggccgcttctc 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
