Query= MSMg01no371_f11.b1 MSMg01no371_f11.b1 CHROMAT_FILE:
MSMg01no371_f11.b1 PHD_FILE: MSMg01no371_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:44 2005
(316 letters)
>mm_chr15_24422476_24423196
Length = 721
Score = 584 bits (302), Expect = e-171
Identities = 314/320 (98%), Gaps = 5/320 (1%)
Strand = Plus / Minus
Query: 1 tgatttaggaaataaatcaggaacccaatttatgtgatcaatattagcatcaaggagatg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 520 tgatttaggaaataaatcaggaacccaatttatgtgatcaatattagcatcaaggatatg 461
Query: 61 ----ctttacagagatgctatgttctggctcctaaaagaggaaaaaaaaaacatcaaaac 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ggctctttacagagatgctatgttctggctcctaaaagaggaaaaaaaaaacatcaaaac 401
Query: 117 aaacctaaaaggtagcca-ttttgtgtaagattaaaagaagtggttgtttttcacagctt 175
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 aaacctaaaaggtagccatttttgtgtaagattaaaagaagtggttgtttttcacagctt 341
Query: 176 ttcagttatttcttattggtggaagtttgttacaatccttattaccaaaagacatgtaaa 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttcagttatttcttattggtggaagtttgttacaatccttattaccaaaagacatgtaaa 281
Query: 236 attagactccatgttagtagccatgttcctgtgggggagataaagaaggatggaggaaga 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 attagactccatgttagtagccatgttcctgtgggggagataaagaaggatggaggaaga 221
Query: 296 gatggataaagaagaggggg 315
||||||||||||||||||||
Sbjct: 220 gatggataaagaagaggggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 721
Length adjustment: 9
Effective length of query: 307
Effective length of database: 712
Effective search space: 218584
Effective search space used: 218584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_f11.g1 MSMg01no371_f11.g1 CHROMAT_FILE:
MSMg01no371_f11.g1 PHD_FILE: MSMg01no371_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:44 2005
(544 letters)
>mm_chr15_24235900_24236844
Length = 945
Score = 1007 bits (521), Expect = 0.0
Identities = 536/541 (99%), Gaps = 1/541 (0%)
Strand = Plus / Plus
Query: 5 gaattcaagaaaaggggctctagtaaaaatgtgggcttatttgcatggtaggctatgttg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagaaaaggggctctagtaaaaatgtgggcttatttgcatggtaggctatgttg 264
Query: 65 taagtacattttcgaaagtattaaattttaccacatactatggaataatctg-aaaaaaa 123
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 265 taagtacattttcgaaagtattaaattttaccacatactatggaataatctgaaaaaaaa 324
Query: 124 gtttactgaatggaatgggaagggtacattaatcgagaaatgctcaatttctttgttcca 183
| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 325 ggttactgaatggaatgggaagggtacattaattgagaaatgctcaatttctttgttcca 384
Query: 184 tgactttgagagatattaaatcttttacagttattaaaaagaaataaatctgaaaaggtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgactttgagagatattaaatcttttacagttattaaaaagaaataaatctgaaaaggtt 444
Query: 244 agcttttttcatttgacccacattaatttatatatagaatctcccctttaaataaacccc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agcttttttcatttgacccacattaatttatatatagaatctcccctttaaataaacccc 504
Query: 304 tgctagttatttagaactcatagctgtgattctcaatgttcttacttaaaagtcaagatc 363
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 505 tgctagttatttagaactcatagctgtgaatctcaatgttcttacttaaaagtcaagatc 564
Query: 364 ctgttatatatagacataaaataaaatgtgttaaaacttctagcagagtatagctcttct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctgttatatatagacataaaataaaatgtgttaaaacttctagcagagtatagctcttct 624
Query: 424 tttctcaaaggagcccacccacagtagctctgacctttctccaagtattcatatcaaagc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttctcaaaggagcccacccacagtagctctgacctttctccaagtattcatatcaaagc 684
Query: 484 tcactcaaacagacaaaaatgcaatagaagtgttttgcactggtttatattgcttctcat 543
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcactcaaacagacaaatatgcaatagaagtgttttgcactggtttatattgcttctcat 744
Query: 544 g 544
|
Sbjct: 745 g 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 945
Length adjustment: 10
Effective length of query: 534
Effective length of database: 935
Effective search space: 499290
Effective search space used: 499290
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
