Query= MSMg01no371_g18.b1 MSMg01no371_g18.b1 CHROMAT_FILE:
MSMg01no371_g18.b1 PHD_FILE: MSMg01no371_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:51 2005
(556 letters)
>mm_chr15_66797373_66798328
Length = 956
Score = 975 bits (504), Expect = 0.0
Identities = 543/556 (97%)
Strand = Plus / Plus
Query: 1 catgccaacatccaaatgtgaccctccacctctgcagtcagcttcctgctgggccacagt 60
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 catgccaacatctaaacgtgaccctccacctctgcagtcagcttcctgctgggccacggt 260
Query: 61 gtggcatcctgctcttgtacaaacccccttccaacaaaacaactggaggccacgtttagc 120
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcgcatcctgctcttgtacaaacctccttccaacaaaacaactggaggccacgtttagc 320
Query: 121 agctccgtctcccatggagagaaaaagcaagtgagaagggctagcctagggtcagatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctccgtctcccatggagagaaaaagcaagtgagaagggctagcctagggtcagatgtg 380
Query: 181 accaagaaggtccacagcctgcagtgagtccaccagattaaccacccatcccaaagctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accaagaaggtccacagcctgcagtgagtccaccagattaaccacccatcccaaagctgg 440
Query: 241 gtccagaaggggcaaggttagggttagaagtggctaaggatgaagtcatttggtccagat 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 gtccagaaggggcaaggttagggttagaagtggctaaggataaagtcatttggtccagat 500
Query: 301 ccattaacctgattctagactggtgcccagcctgtttttctaacctgagaactaagaccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 ccattaacctgattctagactggtgcccagcctgtttttctaacctgagaattaagacct 560
Query: 361 cctcctacctccattgtatgaggcaatatgatagactgcatagtgatgtgagtagggaag 420
|||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||
Sbjct: 561 cctcctacctccattgtatgaggcaatatgataggctgcatagcgatctgagtagggaag 620
Query: 421 agctatgtactaagcaactataaacttctagacctagagggtgaaggaggcatagcaggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agctatgtactaagcaactataaacttctagacctagagggtgaaggaggcatagcaggt 680
Query: 481 atgccctcctcctctctagttgttatgtgaagcttccacacagtgctcctcatgtgctga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgccctcctcctctctagttgttatgtgaagcttccacacagtgctcctcatgtgctga 740
Query: 541 ccactggcctcacttc 556
||||||||||||||||
Sbjct: 741 ccactggcctcacttc 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_g18.g1 MSMg01no371_g18.g1 CHROMAT_FILE:
MSMg01no371_g18.g1 PHD_FILE: MSMg01no371_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:51 2005
(492 letters)
>mm_chr15_66962967_66963858
Length = 892
Score = 866 bits (448), Expect = 0.0
Identities = 478/492 (97%), Gaps = 8/492 (1%)
Strand = Plus / Minus
Query: 5 gaattcccttgct----gttccgtaagcatagcaaaatgccatcagcagcaggcttacag 60
||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gaattcccttgctgaggg----gtaagcatagcaaaatgccatcagcagcaggcttacag 669
Query: 61 gacagaaatgagttttggaggctagacgtccaaagttaaggtgttagtgctggacctggt 120
|||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 668 gacagaaatgagttctggaggctagacatccaaagctaaggtgttagtgctggacctggt 609
Query: 121 gagggatcctccagacttgcagatctctccctccttcctcacagcctttcttttctgcct 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 608 gagggatcctccagacttgcagatctctccctccttcctcgcagcctttcttttctgcct 549
Query: 181 gggtgtgactctaccctttcatgtttcctggtgccacatgtggtcttgtgggacttgagg 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 548 gggtgtgactctaccctttcatgtttcctggtgccacatgtggtcttatgggactcgagg 489
Query: 241 ctgtttagcatatgacccacctcggcagttggagaagcataacattcatgacctcctcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ctgtttagcatatgacccacctcggcagttggagaagcataacattcatgacctcctcat 429
Query: 301 agcttactgttattaactagtgtggtgatggctgattctatttgtccttctcaacctcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 agcttactgttattaactagtgtggtgatggctgattctatttgtccttctcaacctcaa 369
Query: 361 cttccttatctgggaagcaagcacaagaaaatgggaattgtgcaccatgtggccaagagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cttccttatctgggaagcaagcacaagaaaatgggaattgtgcaccatgtggccaagagc 309
Query: 421 aggtgacgatgatggtggtgactaatattaatgatggtggtgacggtggtgagggtgatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aggtgacgatgatggtggtgactaatattaatgatggtggtgacggtggtgagggtgatg 249
Query: 481 acagtggtgacc 492
||||||||||||
Sbjct: 248 acagtggtgacc 237
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
