Query= MSMg01no374_f03.b1 MSMg01no374_f03.b1 CHROMAT_FILE:
MSMg01no374_f03.b1 PHD_FILE: MSMg01no374_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:31 2005
(565 letters)
>mm_chr15_63129434_63130398
Length = 965
Score = 1065 bits (551), Expect = 0.0
Identities = 558/561 (99%), Gaps = 2/561 (0%)
Strand = Plus / Plus
Query: 5 gaattcctacttaatgagaccacatctggctatttttttaaaaaaaaaaatatgggtact 64
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 207 gaattcctacttaatgagaccacatctggctattttttt--aaaaaaaaatatgggtact 264
Query: 65 agaaatcaaacacaggtcttcatacttacaaggtaaattatgcaataattaagccatctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agaaatcaaacacaggtcttcatacttacaaggtaaattatgcaataattaagccatctc 324
Query: 125 cctaccccatcatggtcacttataaagcagttattacactgtctatgtgaaaatgtaggc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cctaccccatcatggtcacttataaagcagttattacactgtctatgtgaaaatgtaggc 384
Query: 185 caacaacccttatataaacacttagtaaaaataaaaatttcattagattaccagtgatgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caacaacccttatataaacacttagtaaaaataaaaatttcattagattaccagtgatgg 444
Query: 245 ccaagccctcagagccattatgaagtctggatcatactaactcattcaatgaacagacta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccaagccctcagagccattatgaagtctggatcatactaactcattcaatgaacagacta 504
Query: 305 tcctgtgacatagcaacatcactgtctacatctacatcattttctcaggaaagagatggc 364
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 505 tcctgtgacatagcaacatcactgtctacatctacattattttctcaggaaagagatggc 564
Query: 365 tcagtggttaaaagcaatagctgcttttccagaggacccagtttcaattcccatcaccca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcagtggttaaaagcaatagctgcttttccagaggacccagtttcaattcccatcaccca 624
Query: 425 catgacagcttacagctgtctgtaactccaggtcagtgggatccaacagcctcacacaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 catgacagcttacagctgtctgtaactccaggtcagtgggatccaacagcctcacacaga 684
Query: 485 taaacatacaggtaagacaccaatacatataaaataaataaaatttttctaaagtatgta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taaacatacaggtaagacaccaatacatataaaataaataaaatttttctaaagtatgta 744
Query: 545 agaagcagaggatggctcgca 565
|||||||||||||||||||||
Sbjct: 745 agaagcagaggatggctcgca 765
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_f03.g1 MSMg01no374_f03.g1 CHROMAT_FILE:
MSMg01no374_f03.g1 PHD_FILE: MSMg01no374_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:31 2005
(516 letters)
>mm_chr15_63291636_63292551
Length = 916
Score = 878 bits (454), Expect = 0.0
Identities = 466/470 (99%)
Strand = Plus / Minus
Query: 1 tttctggtccctatatctgctcagattcctcccatttttaatacacctgagttattacct 60
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 470 tttctggtccctatatctgctcagattcctctcgtttttaatacacctgagttattacct 411
Query: 61 cactgcccaatcccaactctcatgctagatattgaggattttgttgagcacttgtcatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cactgcccaatcccaactctcatgctagatattgaggattttgttgagcacttgtcatac 351
Query: 121 ccaatatagccttctgccctagaatcatctaaagctagagtttattcttctggattcctt 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 350 ccaatatagccttctgccctagaatcatctaaagctagagtttattattctggattcctt 291
Query: 181 attttataatgggtctttgaagctgggggttatgccatatccaagttaataataaacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 attttataatgggtctttgaagctgggggttatgccatatccaagttaataataaacttc 231
Query: 241 attaacaacaaagtacttgattgtttcagttatatctatacacacatatgaatatctaca 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 230 attaacaacaaagtacttgattatttcagttatatctatacacacatatgaatatctaca 171
Query: 301 tgtatacagatgtatgtaagaatacacacatgtgcattcttatgtacattacagggaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tgtatacagatgtatgtaagaatacacacatgtgcattcttatgtacattacagggaaag 111
Query: 361 aacctacaagttggtgatcgggtcattttcaattttcatgatttttcaaggtgcctgtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 aacctacaagttggtgatcgggtcattttcaattttcatgatttttcaaggtgcctgtga 51
Query: 421 gtggttctccgtttactgatggtggagctagaaagccggaaatagcaatg 470
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 gtggttctccgtttactgatggtggagctagaaagccggaaatagcaatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
