NNAAAATATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGA
TCCGCGGAATTCTTATATTCCTAACATAGCCTAGTGCTGTGTAAATGATT
GCTTTACCATAGAATAACAAAATGCCGACGTGTGGTTCAGTCCAGATGCA
TGATTTTAAAGTATTTTTGATCTGAGGATGGTTGAATTTGTGGATCTGAA
ACTGTGTTCTCTACCCACTGTCTTAGGAAATTTTGTCAAACAGTTGTTAC
GCAACCAAAAGAATAAATAATGCAGTCAATAAAAATTAACCAGCAATTAA
AGTTTTTACTTCATCATATATCATGCCTGTGATAATCAAGCCATTCCTTA
TTGAGGCCCTATTATGTGCCACACATGCCTTTAGGTATAAAGCAAATTGA
ATCAAAAAGAGACAAAAATTGTGTTATAAGGAACTTTACATGACCACAAA
TGGCTAAGACAGAATAAATAATTTGAAGAACAATTCTTAATATTATGCCA
CATGGCAGTAAATGCCATATAGATGATGTGGTTTTGGTAACTTCCCTGAG
ATTGTAGGTTAAATCCCCTTTGTTGCCAGTAACATGTTCTTCTAACCAAA
CCCCTGGACTTGACTTGTCTGGGCCCTGAAATTCCCCTCCCCTAAAACAA
ACCTTTCTGGGTTCTTTAATGAACCCTCCCGCTCCCTTGTGGACAAAAAA
ATCCCCCTAATCCCTCACCATTTTTTTAACCCCTCCCTATCCCCTCCCCT
TTTTCTTTTTCTCCTTT

TTTTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAGGCAGGTGGCAGGC
GATGGAGTCAGGAACAGCACCTGCTCCAGTTGTTGGGGGACTCACATGAA
GACCAACCTGCATATCTGCTACATATCTGTGGCAGGCATAGGTTCAGTTC
TTGTATATTCTTTGGTGGGTGGTTCAGCCTCTGGAAGCCCCTAGGGGTCC
AAGTTAGTTGACTCTGTTGCTCTTCCAGTGGAGTCCTTATTCCCTCTGGG
TCCTACTTCCCCCTACTCTTCCACAAGACTCCCTGATCTCTGTGTAAATT
GCTGGTCTCTGGATCTGTTTTGGTAACCTGCTTGGTGGATCCTCTCAGAC
AGTTATGCTTGTATTCTGTCTCTACAATTTCAGAGCAGCCCAATCTTTTA
TAGGCATTTTCTTCCAGCTGGGATTCCGCCTCTCATTTGATTCTAGTCTA
TGTCCAGCTGAACTACATTACATACTTTTCCCTTCCTAAAATGGTACTTT
CCCCCTTATAGTTTTTTTTCCCCCTTTTTAATTTTTCCACTTTTCCGTTT
TTTTCTTCTCATACCTTCTTTCCTAACCGTTTTACCTACCCCTTTTTTCC
CCCTTTACTTTTCCCTCTAAATCCAACATATCCCTTTTTTCACTTTCCAC
GTATCCCCTTTTTTCATACCATTTCTTTCTTCACCTTTCCTCCCGTTTTT
TCTTCCCCTTTTTCTCTCCCCCTCTTTT

Query= MSMg01no375_f05.b1 MSMg01no375_f05.b1 CHROMAT_FILE:
MSMg01no375_f05.b1 PHD_FILE: MSMg01no375_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:53 2005
         (450 letters)



>mm_chr15_42501928_42502778
          Length = 851

 Score =  806 bits (417), Expect = 0.0
 Identities = 438/447 (97%), Gaps = 5/447 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   ggaattcttatatt---cctaacatagcctagtgctgtgtaaatgattgctttaccatag 63
           ||||||||||||     |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattcttata--aaacctaacatagcctagtgctgtgtaaatgattgctttaccatag 264

                                                                       
Query: 64  aataacaaaatgccgacgtgtggttcagtccagatgcatgattttaaagtatttttgatc 123
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aataacaaaatgcccacgtgtggttcagtccagatgcatgattttaaagtatttttgatc 324

                                                                       
Query: 124 tgaggatggttgaatttgtggatctgaaactgtgttctctacccactgtcttaggaaatt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgaggatggttgaatttgtggatctgaaactgtgttctctacccactgtcttaggaaatt 384

                                                                       
Query: 184 ttgtcaaacagttgttacgcaaccaaaagaataaataatgcagtcaataaaaattaacca 243
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgtcaaacagctgttacgcaaccaaaagaataaataatgcagtcaataaaaattaacca 444

                                                                       
Query: 244 gcaattaaagtttttacttcatcatatatcatgcctgtgataatcaagccattccttatt 303
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 445 gcaattaaagtttttacttcatcatacatcatgcctgtgataatcaagccattccttatt 504

                                                                       
Query: 304 gaggccctattatgtgccacacatgcctttaggtataaagcaaattgaatcaaaaagaga 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaggccctattatgtgccacacatgcctttaggtataaagcaaattgaatcaaaaagaga 564

                                                                       
Query: 364 caaaaattgtgttataaggaactttacatgaccacaaatggctaagacagaataaataat 423
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caaaaattgtgttataaggaattttacatgaccacaaatggctaagacagaataaataat 624

                                      
Query: 424 ttgaagaacaattcttaatattatgcc 450
           |||||||||||||||||||||||||||
Sbjct: 625 ttgaagaacaattcttaatattatgcc 651


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 851
Length adjustment: 10
Effective length of query: 440
Effective length of database: 841
Effective search space:   370040
Effective search space used:   370040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)