Query= MSMg01no376_l22.b1 MSMg01no376_l22.b1 CHROMAT_FILE:
MSMg01no376_l22.b1 PHD_FILE: MSMg01no376_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:43 2005
(459 letters)
>mm_chr15_95733507_95734365
Length = 859
Score = 826 bits (427), Expect = 0.0
Identities = 448/455 (98%)
Strand = Plus / Plus
Query: 5 gaattcctcatcacatcggtccaccaacgttaaatgtatcaccagcacgtgaatataaat 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcatcacagcggtccaccaacgttaaatgtatcaccagcacgtgaatataaat 264
Query: 65 taagtggcaattaattagtttatgtattctacttaccaaaccgtttggagcatatgctat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taagtggcaattaattagtttatgtattctacttaccaaaccgtttggagcatatgctat 324
Query: 125 gtaactaataaattagcacatgaagtaattaataatttttacatgaattaagagcctttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtaactaataaattagcacatgaagtaattaataatttttacatgaattaagagcctttg 384
Query: 185 actcatttcttatgaatctttgtaggctttgcagagattagccagatgaaaataaaatat 244
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actcatttctcatgaatctttgtaggctttgcagagattagccagatgaaaataaaatat 444
Query: 245 gaaaatagaataacagagccattggtactttgcttaacggagttacaaggatattagaag 304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 gaaaatagaataacagagccattggtactttgcttaacagagttacaaggatattagaag 504
Query: 305 ttaatctacatatatctcatagagtcttttcccagtgtccttcactctctgactccgtag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttaatctacatatatctcatagagtcttttcccagtgtccttcactctctgactccgtag 564
Query: 365 tctcctcagtccctgctttttccactgacaaggcaggttccgtatcctgtttacagtcag 424
|||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 565 tctcctcagtccctgctttttccactgacaaggcaggttctgtgtcctgtttacaatcag 624
Query: 425 gatttgtacagtgtgtttcacaggtacgtactgta 459
||||||||||||||| |||||||||||||||||||
Sbjct: 625 gatttgtacagtgtggttcacaggtacgtactgta 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_l22.g1 MSMg01no376_l22.g1 CHROMAT_FILE:
MSMg01no376_l22.g1 PHD_FILE: MSMg01no376_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:43 2005
(322 letters)
>mm_chr15_95902104_95902826
Length = 723
Score = 540 bits (279), Expect = e-158
Identities = 312/323 (96%), Gaps = 1/323 (0%)
Strand = Plus / Minus
Query: 1 ctagtggctttcccgattctcttccactgtttggaatgtgtctaatttgttccagcgagg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 523 ctagtggctttcccgattctcttccactgtttggaatgtctctaatttgttccagcgagg 464
Query: 61 atgtcctggggatggttttactgaattccatcagttcggggcaagaacgcttgttcctta 120
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 463 atgtcctagggatggttttactgaattccatcagttcggggcaagaacgcttgtacctta 404
Query: 121 catgagtgcatgttctctaatgagaaaggatggggattttatgatcgcccttggcagggc 180
|||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 403 catgagtggatgttctctaatgagacaggatggggattttatgatcgcccttagcagggc 344
Query: 181 agcgtggatagttaacagtgtcttctaagagagggtagtcaatgtgacagtcacacaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 343 agcgtggatagttaacagtgtcttctaagagagggtagtcaatgtgacagtcacacaacc 284
Query: 241 gacctgtcca-agatttccatgcttctctgggttcttcacagcccagaggagcccaggca 299
||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 283 gacctgtccccagatttccatgattctctgggttcttcacagcccagaggagcccagaca 224
Query: 300 gtaacttcagttactttcctaag 322
|||||||||||||||||||||||
Sbjct: 223 gtaacttcagttactttcctaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 723
Length adjustment: 9
Effective length of query: 313
Effective length of database: 714
Effective search space: 223482
Effective search space used: 223482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
