NNNTTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAAGAGCAGTAGAAACAGAAACCCTTTAAGGCCTGACCAGTA
GAATCCCTTTAGGCTTGAGGATAATATTTGGAATCAGAACAACAGAGCGT
TCTAACTGTGAAAATCTGATCTGAGCCACGGGGGAGAATGAGATATTAAG
AGAGCCAGGGAAAAGTTTGCTGATAGTTCTTTGCATTACGCTCAAACAGG
AAGATGACCTAAGTAATAAAATCTATGTCCATGTCCTTTGACTGCAGGGC
CAAGAAGACAGGATCAGTGCAGAAAAGAAAATATCACAGAAATTTTACTT
CCATCAGAAACACCAACTCAAAATGTCTGGAAAAGAAAATTATGAAGGCG
TGGAGATGTGCCTTGTCCCTTCAGTCTGAATGACATCATAGACTGTAGCA
ATATAAACATTTGGCCACAAACCCCCACCTCTATTCTGTAGTTACTGGCC
TTTCTTCTTCCTCTAATGAAATTCACTGCAGAAAAAAAGTTCCTTTTTGG
TGGTGTTATTTATTTGGTTGGTTTTGNNTTTGNNANTTANCGGTTTANTA
TTTTTCCCANNAAATCATGAAANAATTTTTGCTTGGAATCCGGAGGTTTC
TGCGGGATCCGGAAAAACCCAATGGGGCGACGGATTGGGAACCTTGTGCC
CGGGTTTTCTCGGATTCACCCCGGTGTGGGCGGATCTTTCCTTCTTCCCT
TTTT

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATTATCTTTTAGGGGGATCT
CTAGGACCTTACATTTTTACATAGTGCGATATGTAAAACTTATTCCATGA
AACATATTATGACTTTCTCAATGGGTAAAGAACTACCAAAACTGAGTTTG
CTAAGAAGTCAGGACCCCTATGGTTAAATTAGGGGAAAGATTGAAGAAGC
TGAAGTGGAGGGTGACCCTATGGGAAGTCCAAGCATTCTCAATTAACACA
GACACAGGGAGCTCCTGGAGACTGGGCCACCAATCAGGAGCACACAAGGG
CTGTCTGAGCCCCTGACACATATAGCTCAGAGCATTGCCTGGTCTGGCCT
CAGTGGGGGAAATGCTTAATCCTGGAGAGACTTAATGTTCCAGAGAAGGG
GCAGGCTTGTTGGGGCACACTCTCATAGGCACAGAGGAGGAGAAATGGGA
TGACGAACAATGGGGGTGGGCGGAAATGGGGAACCAGCAACTGGAATGTA
AATAAAATAATTTAAAATGAGAAGTATTGATGTCTGAGTAAAAAAACTTT
TGGGAAAAAAGACTTCTGGTCGAAAAGAAACCCCCTCATTAAAAGGTATT
CTAATGAACCTTTTGTGGACAAATGCGCCCAAAGGTAAAAAAAGGTTTTC
CCCACAATACCGAATCCTTTTAAGGGGCGGGGGAAATACCCAATTTCCCC
GG

Query= MSMg01no377_f06.b1 MSMg01no377_f06.b1 CHROMAT_FILE:
MSMg01no377_f06.b1 PHD_FILE: MSMg01no377_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:28 2005
         (494 letters)



>mm_chr15_16003133_16004026
          Length = 894

 Score =  926 bits (479), Expect = 0.0
 Identities = 488/491 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaagagcagtagaaacagaaaccctttaaggcctgaccagtagaatccctttag 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaagagcagtagaaacagaaaccctttaaggcctgaccagtagaatccctttag 263

                                                                       
Query: 64  gcttgaggataatatttggaatcagaacaacagagcgttctaactgtgaaaatctgatct 123
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 264 gcttgaggataatatttggaatcagaacaacagagggttctaactgtgaaaatctgatct 323

                                                                       
Query: 124 gagccacgggggagaatgagatattaagagagccagggaaaagtttgctgatagttcttt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gagccacgggggagaatgagatattaagagagccagggaaaagtttgctgatagttcttt 383

                                                                       
Query: 184 gcattacgctcaaacaggaagatgacctaagtaataaaatctatgtccatgtcctttgac 243
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcattacgctcaaagaggaagatgacctaagtaataaaatctatgtccatgtcctttgac 443

                                                                       
Query: 244 tgcagggccaagaagacaggatcagtgcagaaaagaaaatatcacagaaattttacttcc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgcagggccaagaagacaggatcagtgcagaaaagaaaatatcacagaaattttacttcc 503

                                                                       
Query: 304 atcagaaacaccaactcaaaatgtctggaaaagaaaattatgaaggcgtggagatgtgcc 363
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 504 atcagaaacaccaactcaaaatgtctggaaaagaaaattatgaaggtgtggagatgtgcc 563

                                                                       
Query: 364 ttgtcccttcagtctgaatgacatcatagactgtagcaatataaacatttggccacaaac 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttgtcccttcagtctgaatgacatcatagactgtagcaatataaacatttggccacaaac 623

                                                                       
Query: 424 ccccacctctattctgtagttactggcctttcttcttcctctaatgaaattcactgcaga 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccccacctctattctgtagttactggcctttcttcttcctctaatgaaattcactgcaga 683

                      
Query: 484 aaaaaagttcc 494
           |||||||||||
Sbjct: 684 aaaaaagttcc 694


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space:   427856
Effective search space used:   427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no377_f06.g1 MSMg01no377_f06.g1 CHROMAT_FILE:
MSMg01no377_f06.g1 PHD_FILE: MSMg01no377_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:28 2005
         (430 letters)



>mm_chr15_16130668_16131497
          Length = 830

 Score =  613 bits (317), Expect = e-180
 Identities = 323/325 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tattatcttttagggggatctctaggaccttacatttttacatagtgcgatatgtaaaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tattatcttttagggggatctctaggaccttacatttttacatagtgcgatatgtaaaac 266

                                                                       
Query: 61  ttattccatgaaacatattatgactttctcaatgggtaaagaactaccaaaactgagttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttattccatgaaacatattatgactttctcaatgggtaaagaactaccaaaactgagttt 206

                                                                       
Query: 121 gctaagaagtcaggacccctatggttaaattaggggaaagattgaagaagctgaagtgga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gctaagaagtcaggacccctatggttaaattaggggaaagattgaagaagctgaagtgga 146

                                                                       
Query: 181 gggtgaccctatgggaagtccaagcattctcaattaacacagacacagggagctcctgga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gggtgaccctatgggaagtccaagcattctcaattaacacagacacagggagctcctgga 86

                                                                       
Query: 241 gactgggccaccaatcaggagcacacaagggctgtctgagcccctgacacatatagctca 300
           ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 85  gactgggccaccaatcaggagcacaaaagggctgtctgagcccccgacacatatagctca 26

                                    
Query: 301 gagcattgcctggtctggcctcagt 325
           |||||||||||||||||||||||||
Sbjct: 25  gagcattgcctggtctggcctcagt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space:   345641
Effective search space used:   345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)