Query= MSMg01no378_b06.b1 MSMg01no378_b06.b1 CHROMAT_FILE:
MSMg01no378_b06.b1 PHD_FILE: MSMg01no378_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:29 2005
(528 letters)
>mm_chr15_72155095_72156022
Length = 928
Score = 982 bits (508), Expect = 0.0
Identities = 520/524 (99%), Gaps = 1/524 (0%)
Strand = Plus / Plus
Query: 5 gaattcaggatatatccagagctccttcaaatcaatgacaagacaaaggaccccacttag 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggatatataaagagctccttcaaatcaatgacaagacaaaggaccccacttag 264
Query: 65 aatgggcaaaacacttgatcagactcttgacaaaacaactgatacaaatgtcagatgagc 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatgggcaaaacacttgatcagactcttgacaaaacaactgatacaaatgtcagatgagt 324
Query: 125 atatgaaaacgcccaaatcttttagtctagttgtcatggaaacgcaaactgaaaccacag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atatgaaaacgcccaaatcttttagtctagttgtcatggaaacgcaaactgaaaccacag 384
Query: 185 cagaagccaggcctggaagtactcaggaggctgcaacagaacagccagaaattctaaaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagaagccaggcctggaagtactcaggaggctgcaacagaacagccagaaattctaaaac 444
Query: 245 ctgagctatatattgagttctaggtcagcttgcaaccttgtcttaaaaagtaaaataaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgagctatatattgagttctaggtcagcttgcaaccttgtcttaaaaagtaaaataaaa 504
Query: 305 taaaaaaatagccgggcggtagtggcgcaagcctttaatcccagcatttgggaggcagag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaaaaaatagccgggcggtagtggcgcaagcctttaatcccagcatttgggaggcagag 564
Query: 365 gcaggtagatttctgagtttgaggccagcctggtctacaaagtgagttccaggacagcca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcaggtagatttctgagtttgaggccagcctggtctacaaagtgagttccaggacagcca 624
Query: 425 gggctatacagagaaaccctgtttcaaaaaaaaaaaaattgagtgttgttgaatgccagt 484
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 625 gggctatacagagaaaccctgtttcaaaaaaaaaaaa-ttgagtgttgttgaatgccagt 683
Query: 485 gtccagtgcattctggccaaactatgctatagtcccagctcact 528
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtccagtgcattctggccaaactatgctatagtcccagctcact 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_b06.g1 MSMg01no378_b06.g1 CHROMAT_FILE:
MSMg01no378_b06.g1 PHD_FILE: MSMg01no378_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:29 2005
(440 letters)
>mm_chr15_72301366_72302205
Length = 840
Score = 760 bits (393), Expect = 0.0
Identities = 396/397 (99%)
Strand = Plus / Minus
Query: 1 ttttatagagcaatcaggtctgaattaaggatgggcttataatcaagagctaaaagcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ttttatagagcaatcaggtctgaattaaggatgggcttataatcaagagctaaaagcttt 338
Query: 61 gggttcagtataaaaaataaagcgaaaatatttgcaagtcttacaaactcttacttgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gggttcagtataaaaaataaagcgaaaatatttgcaagtcttacaaactcttacttgggt 278
Query: 121 ctcatttctcttaatgaatgggaaagtaagggttgatctgattctggtctgattattttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ctcatttctcttaatgaatgggaaagtaagggttgatctgattctggtctgattattttt 218
Query: 181 ctcttgttatgctgtggtttcagatagggtatcatttattttatgctagccttgaactct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ctcttgttatgctgtggtttcagatagggtatcatttattttatgctagccttgaactct 158
Query: 241 gtatgtaactgaggatagccttgtgaagctgaccttcctgcccctctctctcaagtgttg 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 gtatgtaactgagaatagccttgtgaagctgaccttcctgcccctctctctcaagtgttg 98
Query: 301 ggattacagatgtgtgccaccatactcaccttcaaaattctccttaagtcctataaataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 ggattacagatgtgtgccaccatactcaccttcaaaattctccttaagtcctataaataa 38
Query: 361 ataatgacaatatccaatacccaaaatgtgaataatt 397
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 ataatgacaatatccaatacccaaaatgtgaataatt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
