Query= MSMg01no380_a06.b1 MSMg01no380_a06.b1 CHROMAT_FILE:
MSMg01no380_a06.b1 PHD_FILE: MSMg01no380_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:57 2005
(484 letters)
>mm_chr15_85199759_85200642
Length = 884
Score = 920 bits (476), Expect = 0.0
Identities = 479/480 (99%)
Strand = Plus / Plus
Query: 5 aatgagaacctcagaacttacttccatagtgagtgccttcgttcaaacctatgaaatagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aatgagaacctcagaacttacttccatagtgagtgccttcgttcaaacctatgaaatagc 264
Query: 65 attgtagaaagtattttgctttcactatctcttaatactttctctgagaaccttatttta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attgtagaaagtattttgctttcactatctcttaatactttctctgagaaccttatttta 324
Query: 125 gggagactgttgtcagggaaactgtgccagttttttgttactgcttctgaggtaagaact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggagactgttgtcagggaaactgtgccagttttttgttactgcttctgaggtaagaact 384
Query: 185 gtaattatattgtcaaaataatatttagagtattattttcaggcaataattgcagtggtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtaattatattgtcaaaataatatttagagtattattttcaggcaataattgcagtggtc 444
Query: 245 tgacaaatatattatggtcatcaaattttatgtaaacacaagtatgagttattttaattg 304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 tgacaaatatattatggtcatcaaattttatgtaaacataagtatgagttattttaattg 504
Query: 305 agctattgatgttgtttttggcatatattctttcctaatctgtaaaaataatgctggcat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agctattgatgttgtttttggcatatattctttcctaatctgtaaaaataatgctggcat 564
Query: 365 tttttaggggctttgcactgttcttagtgtttacataaagatcagttgacaggctgttgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttttaggggctttgcactgttcttagtgtttacataaagatcagttgacaggctgttgg 624
Query: 425 ttaaagtaaactgttctttcacttgcctgcagattccttgcctgtgcctaggctgtctgt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttaaagtaaactgttctttcacttgcctgcagattccttgcctgtgcctaggctgtctgt 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no380_a06.g1 MSMg01no380_a06.g1 CHROMAT_FILE:
MSMg01no380_a06.g1 PHD_FILE: MSMg01no380_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:57 2005
(513 letters)
>mm_chr15_85375369_85376280
Length = 912
Score = 977 bits (505), Expect = 0.0
Identities = 511/513 (99%), Gaps = 1/513 (0%)
Strand = Plus / Minus
Query: 1 ctccctggggtggccacttccatcacccctcaacagccggtcagccgactttgccaggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ctccctggggtggccacttccatcacccctcaacagccggtcagccgactttgccaggtc 653
Query: 61 tgagcagaggggaaagagaatttgccagcttccctaagggtcttggtgacctaatttaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 tgagcagaggggaaagagaatttgccagcttccctaagggtcttggtgacctaatttaga 593
Query: 121 cccaggaacgtggattcctgcacctgcccagtctctgctttatccagggctcctgtccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 cccaggaacgtggattcctgcacctgcccagtctctgctttatccagggctcctgtccag 533
Query: 181 cctctcccaggacagggacaaggcagctctgggtcctctgaaaacaatactggccacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cctctcccaggacagggacaaggcagctctgggtcctctgaaaacaatactggccacaca 473
Query: 241 ggactgtgcagagtccatttggcttaggggctatctccattctctcctatctcatgtgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 472 ggactgtgcagagtccatttggcttaggggctatctccattctctcctatctcgtgtgat 413
Query: 301 aagtggagctcagagcccacagaccctggaaatgtattctggcaagagaggttctggtgg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 412 aagtggagctcagagcccacagaccctggaaatgtattctggcaagagaggttctggt-g 354
Query: 361 ggggtaggggtggcccagaagggcaaagcagaggctgctatatgcttgagacaattgtcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ggggtaggggtggcccagaagggcaaagcagaggctgctatatgcttgagacaattgtcc 294
Query: 421 ttatctgagggaagagggtcccccagtgatcacttccttcccccgtgggaaggaagacac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ttatctgagggaagagggtcccccagtgatcacttccttcccccgtgggaaggaagacac 234
Query: 481 cttctggtatggcttggtgggtagataggtggg 513
|||||||||||||||||||||||||||||||||
Sbjct: 233 cttctggtatggcttggtgggtagataggtggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 912
Length adjustment: 10
Effective length of query: 503
Effective length of database: 902
Effective search space: 453706
Effective search space used: 453706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
